Trachemys scripta elegans (red-eared slider): 117880988
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Entry
117880988 CDS
T07347
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tst03016
]
117880988 (TRUB1)
Enzymes [BR:
tst01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
117880988 (TRUB1)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117880988 (TRUB1)
Prokaryotic type
117880988 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
DMA
Motif
Other DBs
NCBI-GeneID:
117880988
NCBI-ProteinID:
XP_034633596
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All DBs
Position
7:complement(114362198..114406902)
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AA seq
289 aa
AA seq
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MAEEVHGKLGHVMANPAAKLLSLSGLFAVYKPKGPTSANVLNQLKEKLLAEAGIQKCARK
RKKQILKIGHGGTLDSAAAGVLVVGIGKGTKMLGNILAGSKKYLAIGELGKATDTLDATG
KVTEEKPYDQITKEDLERVLQKFTGDIMQVPPLYSALKRDGQRLSSLMKKGEAVEAKPAR
PVTVYSLSLQNFQSPLFTLDVECGGGFYVRSLVSDIGKELSSCANVQELTRTKQGPFTLE
EHALHEDKWTIDEIAQSLEHCMSFLAVEPSLKKLKTEHSEESTVNCEDK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaggtgcacgggaagttggggcatgttatggccaacccagcagctaaactg
ctctctctgagcgggctctttgctgtgtataaacccaaagggcccacgtctgctaacgtg
ctcaaccagctgaaggagaagctgctggcagaagctggtatacaaaagtgtgcaagaaaa
aggaaaaaacagattttgaagattggacatggtgggactctagatagtgcggctgcagga
gttctggtggtcggtattggaaaaggaactaaaatgctgggcaatattttggcaggttcc
aagaagtacttggccattggggaactgggaaaagctactgatacattagatgctacagga
aaagtaaccgaagaaaagccttatgatcagataacaaaagaagatcttgaacgtgtgctg
caaaagttcacaggggacataatgcaagttcctccactctattctgctctgaagagagat
ggacaaaggctgtcatctctgatgaagaaaggagaagcagtggaagcaaagcctgctagg
ccggttacggtgtacagcctctctctccaaaacttccagtcaccactgttcacgctggat
gttgaatgtggaggtggcttttatgtgagaagtctggtcagtgacattggaaaagaactc
tcttcctgtgccaatgtgcaagagctgacccggaccaaacaaggaccatttacactagag
gagcatgcacttcatgaagacaaatggacaattgatgaaattgcacagtccttggagcat
tgcatgtcttttcttgcagtagagccctctcttaaaaaattaaagactgaacattctgaa
gaatccactgtgaattgtgaagataagtga
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