Trachemys scripta elegans (red-eared slider): 117881166
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Entry
117881166 CDS
T07347
Symbol
PWP1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117881166 (PWP1)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
90S particles
Other 90S particles
117881166 (PWP1)
Pre-60S particles
Other pre-60S particles
117881166 (PWP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40
Beta-prop_CAF1B_HIR1
EIF3I
DSE1_N
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR3_2nd
WD40_RFWD3
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR41
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
PAC11
ANAPC4_WD40
ASA1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
TRM82_WD
Beta-prop_MIP2
Beta-prop_RIG_1st
Beta-prop_DCAF12
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
117881166
NCBI-ProteinID:
XP_034633943
LinkDB
All DBs
Position
1:complement(95315355..95347576)
Genome browser
AA seq
499 aa
AA seq
DB search
MSCPVTCAAWVRRGVARGTPDKVRLSAQELKRLIGEAAETLREEADGSDEEEHGQAAEDD
MDVASGETVEPPQEDGDQEEDTEKLNDDELAEYGLDKYDEEENTDAVSLGDTLAGLTVFG
SNERDPYITIKNTEQYEQEDFLIKPSDNLIICGRVDKDHCSLEVHLYNHEEDSFYVHHDI
LLPAYPLSVEWLNFDPNPDESPGNYVAVGNMTPVIEIWDLDIVDSLEPVFSLGSKKEKKK
KKKGKKNSSTEGSQDGHTDAVLDLSWNKQNRNVLASASADNTVILWDMSVGKPAANLTLH
MDKVQTLQFHPFETQTLVSGSYDKSAVLYDCRSPQDNHRIWRFSGQVERVTWNHFSPCNF
LASTEDGFVYCLDARSDKPLFTLKAHNEEVSGLQLSSQIKGCLVTSSADKYVKIWDILGD
KPSLIHSRDMKMGVLFCAACCPDLPFVYAFGGEREGLRVWDISSISAVNEVFGSRERLVA
ANTNSATSSSFASSSSKSP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagctgccccgtgacttgcgccgcctgggtgcgcagaggggtcgccaggggaacgccc
gacaaggtgcggctcagcgcgcaggagctgaagcggctcatcggggaggccgcggagacg
ctgcgagaagaagcagatggtagtgatgaagaagaacatggacaggctgcagaagacgac
atggatgttgctagtggtgagacagttgagcctcctcaagaagatggggaccaggaagaa
gacactgaaaagctgaatgatgatgagctggcagagtatggtttggataaatatgatgaa
gaggagaatacagatgctgtgagccttggagacaccttagccggtcttacggtgtttggg
agtaacgaacgtgatccttatatcactattaaaaatactgagcaatatgaacaggaagat
tttttgattaagcccagtgacaatctgatcatttgtggaagagttgataaggaccactgc
agtctagaggttcacctttataatcatgaagaggactcattttatgtacaccatgatatc
ctcttacctgcataccctctaagtgtggagtggcttaattttgatcctaatcctgatgaa
tctccaggaaattatgttgcagtgggtaacatgacccctgttattgagatctgggacctt
gatatagtggattctctagagccagtcttttcccttggaagtaaaaaagaaaaaaagaag
aagaaaaagggaaagaagaattcatctacagaagggagtcaggatgggcatactgatgca
gttcttgacctttcatggaataagcaaaacagaaatgtgttagcaagtgcttcagctgac
aacactgtaattctgtgggatatgtctgtgggtaaaccggcagcgaaccttactttacat
atggacaaggtccagacactacaatttcatccatttgaaacacagacccttgtttctgga
tcttatgataagtctgctgttctgtatgactgtagaagtccacaggataatcatcgaatc
tggcggtttagtggacaggttgagagagtgacttggaatcatttttcaccctgtaacttc
ttagctagcacagaagatggctttgtgtactgtctagatgctcgttccgataagccactt
tttactctgaaggctcataatgaggaagtatctggactccaattaagcagtcagatcaaa
gggtgccttgtgacatcatctgctgacaaatatgtaaaaatttgggatatactgggggac
aaaccaagtctgatccattccagggatatgaaaatgggtgttctcttctgtgcagcttgt
tgccctgatttgccatttgtctatgcctttggaggggagagagaagggcttcgagtctgg
gatataagcagtatttctgcagtgaatgaagtttttggaagcagagagaggttggtagct
gccaatacaaactctgcaactagcagctcctttgccagcagtagcagcaaaagtccataa
DBGET
integrated database retrieval system
