Trachemys scripta elegans (red-eared slider): 117881205
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Entry
117881205 CDS
T07347
Symbol
RPAP2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tst01009
]
117881205 (RPAP2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117881205 (RPAP2)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117881205 (RPAP2)
Protein phosphatases and associated proteins [BR:
tst01009
]
HAD phosphatases
Fcp/Scp phosphatases
117881205 (RPAP2)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117881205 (RPAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
117881205
NCBI-ProteinID:
XP_034634021
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All DBs
Position
8:complement(75771891..75844983)
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AA seq
645 aa
AA seq
DB search
MMMAAAEQLRVGVKARSSRRRAGNKQSSILKNEDVAQRRAALEAAIRKKFEYEKKALRVV
EQLLEEDITEEFLVNCGSFITPSHYKDAVEERFIIKLCGYPLCRNGLENVPKQKYRVSTK
TNKVYDITERKCFCSNFCYRASKYFEAQIPKSPVWMREEERPPDIELLKEGQSGQSGEEV
KLHDEVIKVSDIENPKTSASQCDSASHGTYSDSSSDTEQEFVSSILPENRSNATSLVRPL
HKKSILKKKPGQNINSTHRDGDHRVINVTEQLSECKLDIQEKKSSCSVSGISSDIIISEN
LKNAENYESRCNGSQVVLLGVSKEGAEQLKKILAKSKQHIKPKMSAPVDSLTATRNVLDV
LKQTFIEWRTEETYKFLCGSSYATVHLPEHTSAVNCEKEELDEDDLETADDLNDAAAATR
ESKNSLNQSLPFGGTGATVKPLPSYEKLKEETELLGLRVKEFYKGKCLLTEEATTQVEGA
EHPSSVKDDQQGDPILPLVDSHAQMQIRKQIVLEKLRKVLPAVLGPLQITLGDVYMELKN
LVKTFRLTNTNIIHKMPEWTLIAVVLLSAQGFLEAAGEETDSSGSSEQRLSQIIPVFANS
QQSPVYTQFLSTLLEELHFTKEDLGSLTRIFRHNSMPEWSVISKL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcggcggcggagcagctgcgggtcggtgtgaaggcgagatccagccggaga
cgcgcaggaaataaacaatcaagtattttgaaaaatgaagatgtagcacaaaggagggca
gcacttgaggctgctattagaaagaagtttgaatatgagaaaaaagctctgcgtgttgtt
gaacagctattggaggaagatattacagaagagttccttgtgaattgtggaagttttatt
accccatctcactataaggatgctgtggaggagcgttttatcatcaaactctgtggctat
cccttatgtcgaaatgggctagaaaatgtgccaaaacagaagtacagagtttcaacaaaa
acaaacaaagtttatgatattacagaaagaaagtgtttttgcagcaatttttgttacaga
gcatctaaatattttgaagctcagattcccaaaagtccagtgtggatgcgagaagaagaa
agaccaccagatatagaactgctgaaggaggggcaaagtggccagtctggggaagaagta
aaactacatgatgaagtcattaaagtctcagatattgaaaatcctaagacatcagcaagc
cagtgtgactctgcttcccatggcacatacagtgacagcagcagtgatactgaacaagaa
tttgtttcctctattctaccagaaaatcgatcaaatgcaaccagtctggtgcgaccattg
cacaaaaaaagtatactcaaaaagaagcctggtcaaaatataaactccacgcatagagat
ggagaccatagagtgataaatgtcaccgaacaattaagtgagtgcaaattagatatccag
gaaaaaaagagttcttgttctgttagtggcatttcttcagacattattatatcggaaaac
ttaaaaaatgcagaaaactatgaaagtaggtgtaatggttcacaagtagttttgctaggt
gtgagcaaagagggggcagaacaactcaaaaaaatacttgctaaatcaaagcagcatatc
aaacctaaaatgagtgcaccagttgattcccttactgctacacgtaatgtgttagatgtg
cttaagcagacttttattgaatggagaactgaagaaacttacaagtttctctgtggatcc
agctatgctactgtacacttaccggaacacacatcagctgtcaactgtgagaaagaagaa
cttgatgaggatgacttagaaacagcagatgaccttaatgatgctgctgctgctacaagg
gaatctaaaaacagtttgaaccagtctttgccttttgggggcacaggtgcaacagttaaa
cctttgcctagctatgaaaaactaaaagaagaaacagaactattaggactaagagtaaag
gaattctataaaggaaaatgcctcttgactgaagaagcaacaacacaggtggaaggagcg
gagcatcctagcagtgttaaagatgaccagcagggtgatcccatcctcccgcttgtagat
tctcatgcccaaatgcagattcgaaagcagattgtacttgaaaaattgagaaaagtattg
cctgcagttttgggccctcttcagattacactaggtgatgtttacatggaactgaaaaat
cttgtcaaaactttcaggttaacaaatacaaatattattcacaaaatgccggaatggacc
ctaattgctgttgtgttgttatcagctcagggatttctggaggctgcaggtgaagaaact
gacagtagtgggagcagtgaacaaaggttgtcacagattattccagtctttgcaaattct
caacagagtccagtatatacacagttcctgtctacgttacttgaagaattgcatttcact
aaagaagatcttggaagtttaacaagaatatttagacataacagcatgcctgaatggtca
gtcatctcaaaactatga
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