Trachemys scripta elegans (red-eared slider): 117881212
Help
Entry
117881212 CDS
T07347
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117881212 (FUBP1)
03041 Spliceosome [BR:
tst03041
]
117881212 (FUBP1)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117881212 (FUBP1)
Spliceosome [BR:
tst03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117881212 (FUBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
KH_KHD4_2nd
Secretin_N
KH_PARP10_1st
CG7065_mid
Motif
Other DBs
NCBI-GeneID:
117881212
NCBI-ProteinID:
XP_034634039
LinkDB
All DBs
Position
8:84226103..84264746
Genome browser
AA seq
682 aa
AA seq
DB search
MADYSTVPPPASGAPGGGGGGGGGVNDAFKDALQRARQIAAKIGGDGGTSMNSNDYGYGG
QKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMT
EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPDRSCMLTGTPESVQSAKR
LLDQIVEKGRPTPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMI
QDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREARNEYGSRIGGNEGIDVPI
PRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDL
LRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSI
SQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGP
HGVVPGPHGPPGPPGPGNPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPN
PPDPGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPGGPPTTQTNGQGEQPNPAPAGQVD
YTKAWEEYYKKMGQQGQPQDYSKAWEEYYKKQGQAVPAPAGAPPGQPDYSAAWAEYYRQQ
AAYYAQTSPQGMPQHPPAPQGQ
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcggattattccacggtgccccctcctgcttcgggcgcgcccggaggaggaggaggc
ggaggtgggggagtcaacgatgcctttaaagacgcactgcagcgggctaggcagattgca
gcaaaaattggaggtgatggagggacatcaatgaattcaaatgattacggttatggagga
caaaaaagacctcttgaagatggagatggctcttggacaagtccgagcagtacaacacac
tgggagggaatgccctctccttttaaagatcaaccagatgctaagaaagttgctcctcag
aatgactcttttggaacccagctacccccaatgcatcagcaacaaaggtctgtaatgaca
gaggagtacaaagttccagatggaatggttggattcataattggcagaggaggagaacag
atttcacgcatacagcaagaatctggatgcaaaatacagattgctcctgatagcggtggc
ctgcctgatagatcttgcatgttaactggaacacccgagtctgttcagtctgcaaagaga
ctgcttgaccagatagttgaaaagggaagacctacacctggctttcatcatggtgatgga
ccaggaaatgctgtccaagaaattatgattccagctagtaaggcaggattagttattgga
aaaggtggagagaccattaagcaacttcaggaacgagcaggagtcaaaatggtcatgatt
caagatgggccacagaacactggtgcagacaaacctcttaggattacaggagacccttac
aaagttcaacaagccaaggaaatggtgttggagttgattcgtgatcaaggtggctttaga
gaggcgcgcaatgaatatgggtcaagaataggaggaaatgaagggatagatgtcccaata
ccacgatttgctgttggtattgtaattggaagaaatggagagatgatcaaaaagatacag
aatgatgctggtgttagaatccagtttaagccagatgatggaacaactccagatagaata
gcccaaattacaggacctccagacagatgtcaacatgctgcagaaattattacagacctc
cttcgaagtgtccaggctggtaatcctggtggtccaggacctggtggtcgaggaaggggt
agaggccaaggcaactggaacatggggcctcctggtggattacaggaatttaattttatt
gtacccactggaaaaactggattaatcattggaaaaggtggtgaaactatcaaaagcata
agtcagcaatctggggctagaatagaacttcagagaaatcctccaccaaatgcagatcct
aacatgaagttgtttactatccgcgggacaccacagcaaattgattatgctcggcaactt
atagaagaaaagattggaggtccagtaaatcctttgggtccacctgttcctcatgggccc
cacggtgttgttcctggcccacatggacctcctggcccaccaggtcctggcaatcctatg
gggccttataatcctgctccttataatccagggcctcctggtccagcacctcatggccct
ccagccccatatgctccacaagggtggggaaatgcctatccacactggcagccacctaat
ccaccagatccaggtaaaccaggaacagatcccaattcagcagcatgggcagcttattat
gctcactattatcagcagcaagcacagccgccacctgcagcccctcctggtggaccacct
acaacccaaactaatggacaaggagaacaaccaaatccagcaccagcagggcaggttgat
tacaccaaagcttgggaagagtactacaaaaaaatgggtcaacaagggcagccacaagat
tattcaaaggcttgggaggaatattacaagaagcaaggtcaagcagttccagcgcctgct
ggggccccaccaggtcagcctgattatagtgcagcatgggctgaatactacagacagcaa
gcagcatattatgcccagacaagtccacagggaatgccacagcatcctccagcaccacag
ggccaataa
DBGET
integrated database retrieval system
