Trachemys scripta elegans (red-eared slider): 117881238
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Entry
117881238 CDS
T07347
Symbol
RARS1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117881238 (RARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tst01007
]
117881238 (RARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tst03016
]
117881238 (RARS1)
03029 Mitochondrial biogenesis [BR:
tst03029
]
117881238 (RARS1)
Enzymes [BR:
tst01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
117881238 (RARS1)
Amino acid related enzymes [BR:
tst01007
]
Aminoacyl-tRNA synthetase
Class I (G)
117881238 (RARS1)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117881238 (RARS1)
Prokaryotic type
Other AARSs
117881238 (RARS1)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
117881238 (RARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
LisH_TPL
tRNA-synt_1
tRNA-synt_1g
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
117881238
NCBI-ProteinID:
XP_034634106
LinkDB
All DBs
Position
8:28630385..28664169
Genome browser
AA seq
661 aa
AA seq
DB search
MEAHVAQYSARLLQQEKEIKILAAEIDGLKNFGCLEVSPSLEGLRDENAKLKYRLNVLQK
SLQEEKNKSVKSMININSRVQEIFRDAIKAAYPDLENPPLAVTPSQQPKFGDYQCNSAMS
ITKMLPKTNEQKVSPREIADNISRNIPENEYIEKVEIAGPGFINVHLRKDFVSKQLSSLL
VNGVQPPAIENRKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFVGYDVLRLNHLG
DWGTQFGMLIAHLQDKFPDFLTVSPPIGDLQAFYKESKRRFDTEEEFKKRAYQCVVLLQS
KNPDFIKAWKLICDVSRKEFQKIYDCLDIKLIERGESYYQDKMTDIVQEFEERGFVQMDD
GRKIVFVPGYSVPLTIMKSDGGFTYDTSDLAALKQRLFEEKADIIVYVVDSGQSVHLQTV
FAAGQMIGWYDPALTRVVHAAFGVVLGEDKKKFKTRSGDTVRLIELLEEGLKRSMDKLKD
KERDKVLTEEELKAAQTSVAFGCIKYADLSHNRMNDYIFSFDKMLDDRGNTAAYLLYAFT
RIRSIARLANIDEEMLQKAARETKILLDHEKEWKLGKCILRFPEILQKILDDLLLHTLCD
YLYELATTFTEFYDNCYCVEKDRQTGTIVKVNMWRMLLCEATAAVMAKGFDILGIKPVQK
M
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcacgtggctcaatattccgctcggctcctgcagcaggaaaaagagatcaag
atcttggctgcagaaattgatggactgaagaactttggctgcttggaagtatctccaagt
ttggaaggattgcgagacgaaaacgcaaagcttaagtaccggctaaacgttcttcaaaag
agtcttcaagaggaaaaaaataagtcagtgaaaagcatgattaatatcaacagccgtgtt
caggagatctttagagatgccatcaaggctgcatatccggatttagaaaaccccccactg
gcagtcacgccaagtcagcagcccaaatttggggattaccagtgtaacagtgctatgagc
ataacaaagatgcttcccaaaaccaacgaacagaaagtgagcccaagagaaattgctgat
aacatttccagaaacattcctgaaaatgaatacattgagaaggttgaaatcgctggtccc
ggttttattaacgtccacttgagaaaggattttgtgtccaaacaactgagcagtttactg
gtgaatggagttcaaccaccggctattgaaaacaggaaaaaggtggtggttgacttctct
tcccctaacattgccaaagagatgcatgttggtcacctgcgctcgactattattggagac
agcatgtgccgtctgtttgagtttgtgggctatgatgttctgaggttaaaccatttagga
gattggggcacccagtttggaatgctcattgctcacctccaagataagtttccagatttc
ctgactgtttcaccccccattggggatctccaagctttttacaaggaatccaagcggaga
tttgacacagaggaagaatttaagaagcgagcctatcagtgtgtggtcctactacagagc
aaaaatccagacttcattaaagcatggaaactgatctgcgatgtatctcggaaagagttc
caaaaaatctatgactgcttggacattaaactaatagagaggggggaatcatactaccaa
gataagatgacagatattgtgcaagaatttgaagaaagaggatttgtacagatggatgac
gggcggaagattgtgtttgtcccaggatactctgttcctttaacaatcatgaagtcagat
ggaggtttcacatatgatacatctgacttagctgctcttaagcaaaggctatttgaggaa
aaggctgatatcattgtttatgtggtggatagtgggcagtccgtgcacttgcagacagta
ttcgcagcaggtcagatgattggctggtatgaccctgccctgaccagagtagtccatgct
gcatttggagtggtactgggagaagataagaaaaagttcaaaactcgttcaggggataca
gtgcggctcattgagctactggaagaggggctgaaacgatcaatggacaaactgaaggac
aaagagcgtgacaaggttttaactgaagaagaactgaaggctgcccagacatcagttgct
tttggctgcattaaatacgctgacctctcccataacaggatgaatgattacatcttttct
tttgataaaatgttggatgatagaggaaatacagctgcttacttgctctatgccttcact
cgaatcagatctatagcacgtctggccaacattgatgaagagatgctgcagaaggcagct
agagaaacaaagatattactggaccacgaaaaggagtggaaactgggcaagtgcattctg
agattccctgagattctgcagaagattttggatgatctcttattacacacactctgtgat
tacctctatgagctggccaccaccttcacagagttctacgataactgttactgtgtggaa
aaagacagacaaactggaacgatagtgaaggtgaacatgtggagaatgttgctgtgtgaa
gcaacagctgccgtcatggccaaagggtttgacatcctgggcatcaaaccagtccaaaag
atgtaa
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