Trachemys scripta elegans (red-eared slider): 117881261
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Entry
117881261 CDS
T07347
Symbol
PDLIM4
Name
(RefSeq) PDZ and LIM domain protein 4
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117881261 (PDLIM4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117881261 (PDLIM4)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117881261 (PDLIM4)
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Ortholog
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
BNR_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117881261
NCBI-ProteinID:
XP_034634161
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All DBs
Position
8:14350120..14448407
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AA seq
330 aa
AA seq
DB search
MSQTVALTGPSPWGFRLVGGKDFSTPLTISRINPGSKAAMANLCPGDIILAINGESTENM
THLEAQNKIKACMDQLMLSVNRAEGKTWSPNILEDGKAQAYRINIESESQDNGPTQSRRP
VPYAPGGSPTDNKQMLNLQYNNPTRLYPNNNVESSLPAQMSGLHIASPHSADPLKPLPRS
RNGIDMESDVYKMLQDYEKPASEPKQSGSFRYLQGMLEAGENGEKLDRLAGPRNIKSPVS
KLGGAMSGLQMLPECTRCGNGIVGTIVKARDKLYHPECFMCNDCGLNLKQRGYFFIEEQL
YCETHAKERVKPPEGYDVVAVYPNAKVELV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagacagtggctctgaccggcccctcgccctggggcttccggctggtggggggc
aaggacttcagcaccccgctgaccatctccaggattaatcctgggagtaaggcagccatg
gctaacctgtgccccggagatattattctggcaattaatggagagagcacagaaaatatg
actcatctagaagcacaaaacaagatcaaagcatgtatggaccagctgatgctatctgtg
aacagggctgaaggcaagacttggtctcctaatattctagaagatggaaaagcacaagct
taccggatcaacatagagtcagaatcacaggataatgggcccactcagagccgaagacca
gtgccctatgctcccggagggagccccactgacaacaaacagatgttgaacttacagtac
aataatccaacgcgactctatccaaataacaatgtcgaatccagtttgccagcacagatg
agtggtctccatattgcttcgccacacagtgccgaccctttaaaacctctcccgagaagc
agaaatgggattgacatggagtcagatgtgtacaagatgctccaggattatgaaaagcca
gcttcggaacctaagcagtctggatcgttccggtatttgcagggcatgttagaagccgga
gagaatggtgaaaaactcgaccgactcgctggcccaagaaacatcaaatctccagtatca
aaacttggtggtgccatgtctggattgcagatgcttcctgagtgcaccagatgtggaaat
gggatcgtagggaccattgtcaaagctcgggacaagctctaccacccagaatgtttcatg
tgcaatgactgtggcctaaacctgaagcagaggggatatttcttcatcgaggagcagctg
tactgcgaaacgcacgcaaaggaaagggttaagccccccgaaggatatgatgttgttgct
gtttatccaaacgcaaaagtcgaacttgtctaa
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