Trachemys scripta elegans (red-eared slider): 117881277
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Entry
117881277 CDS
T07347
Symbol
SLC44A5
Name
(RefSeq) choline transporter-like protein 5
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117881277 (SLC44A5)
04147 Exosome [BR:
tst04147
]
117881277 (SLC44A5)
Transporters [BR:
tst02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
117881277 (SLC44A5)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
117881277 (SLC44A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
117881277
NCBI-ProteinID:
XP_034634216
LinkDB
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Position
8:85803279..85902506
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AA seq
713 aa
AA seq
DB search
MAREEENYYGKHGEPRKFDPKFRGPIHNRHCTDVLCCVIFIVVILGYIALGILAWVHGDP
RKVVYPTDSYGQFCGQKDTINENKTSLFYFNILKCASPIVLINLQCPTTQLCVSKCPDRF
ATYIDMQASYRYNKSYWEYYRQFCKPGFNKPLKSVAQVIRDEDCPSMIIPSRPFLKRCFP
DFSTKNGILTVANQTTFKDGRGKTRNVTDLREAANGINNVLDARSVGMKIFEDYASSWHW
ILIGLFIAMVVSLLFLVLLRFTAGVLFWIFILGVIGIIGYGIWHCYWEYDHLQGTPGSDL
TIYDIGFQTDFRVYLQLRQTWLAFMIILCIVEVFIILMLIFLRNRIRIAIALLQEGSRAI
GYIMSTLFYPIITFILIAICISYWAVTAVFLSTSGEPVYKVMANQTLCKYANLTCDPETF
NTTNVTKLCVGAQCTFAFYGGESFYHKYIFIFQLSNAFVFLWLVNFAIALGQCTLAGAFA
SYYWAFRKPADIPTCPLFSSFGRAIRYHTGSLAFGSLILAIVQLIRIILEYLDHKLKGTQ
NSFTRFLLCCLKCCFWCLEKFIKFINRNAYIMIAIYGKNFCTSAKEAFFLLMRNVVRVAV
LDKVTDFLLFLGKLLVAGGVGVLAFFFFTHRIPVFTQETPTLNYYWVPLLTVIIGSYLIA
HGFFSVYAMCVDTLFLCFLEDLERHDGSAERPYYMSKSLLKILNKPNVETKRH
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctagggaagaagaaaactactacgggaaacatggtgaaccaaggaaatttgaccca
aagttcagaggacctattcacaacaggcactgtaccgatgttctgtgctgtgtaatcttc
atagtcgtcattctgggttacattgcattaggaattctggcttgggtgcatggtgacccc
aggaaggtggtctatccaactgacagctatggacagttctgcggccagaaggacaccata
aatgagaacaagaccagtttgttttactttaacattctgaaatgtgccagcccaatagtg
ctaataaacctacagtgccctacaacacagctttgtgtctcaaagtgcccagacaggttt
gcaacatacatagacatgcaagcttcctacagatataacaaaagctattgggagtactac
aggcagttctgcaaacctggttttaataagcctttgaagtctgttgctcaagtgatccgt
gatgaagattgcccttcgatgatcattccaagcaggccttttcttaaaagatgctttcct
gacttctccacgaagaatgggattctgacggtggcaaatcagacgacattcaaagatgga
agagggaaaacaagaaatgtaactgatctcagggaagctgcaaatggtatcaataatgtc
cttgatgcaagatcagttgggatgaaaatttttgaagactatgccagttcctggcattgg
attttaattggtctgttcattgcaatggttgtgagcctgctcttccttgtgctcctgagg
ttcacagcgggggtcctcttctggattttcatccttggcgtgattggaattataggatat
ggtatctggcattgttactgggagtatgatcatcttcaggggacacctggatctgacctc
acgatctatgatattggcttccagactgacttcagagtatatctgcagctgaggcaaaca
tggttagcatttatgataatactttgtattgtggaagtcttcatcatactgatgctgatc
ttcctgaggaatcggatccggattgctattgcactcttgcaggaagggagtagggctatt
ggctacataatgtccacattattctaccccattatcactttcattctcattgcaatctgt
atttcctattgggcagtgacagctgttttcctgtctacatcaggggaacctgtgtataaa
gtaatggctaatcaaacactgtgcaagtatgcaaacctgacctgtgacccagagactttt
aacacaaccaatgtgaccaaattatgtgttggtgctcagtgtacttttgctttctatggg
ggagaaagcttctatcacaaatacatcttcatctttcaactctccaatgcttttgtcttt
ctgtggctggtaaactttgcaattgcactgggtcagtgtacccttgctggtgcctttgcc
tcttactactgggcctttagaaaacctgctgatattccaacatgcccactcttttcttca
tttggacgagcaatacgatatcacacaggttcactagcatttggatcattaattcttgca
atagtccagttgattagaataatcttggagtacctggatcacaagctgaaaggtacacag
aactcctttacgagatttctgctctgttgcctcaaatgctgtttttggtgtttggaaaaa
ttcataaagttcataaacagaaatgcctacatcatgattgcgatatatggtaaaaacttc
tgcacctcagcaaaggaagcgttctttctgctaatgcggaacgtggtgagagttgcagtg
ctggacaaagttacagatttcttgttgttccttgggaaacttctcgttgctggtggtgta
ggtgttctagccttctttttcttcacacatagaataccagtgttcacacaagaaacccca
acattaaattactactgggtacccctgttgactgtcattattggctcttacctaattgca
catgggttcttcagtgtctatgcaatgtgcgttgatacacttttcctctgctttttggaa
gatttagaaagacatgatggctctgcagaaagaccctattatatgagtaaatctctcttg
aagattttgaacaagccgaatgtagaaaccaagagacattag
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