Trachemys scripta elegans (red-eared slider): 117881316
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Entry
117881316 CDS
T07347
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117881316 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117881316 (TPR)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117881316 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
117881316
NCBI-ProteinID:
XP_034634309
LinkDB
All DBs
Position
8:complement(56930643..57012911)
Genome browser
AA seq
2368 aa
AA seq
DB search
MAAVLQQLLERAELAKLPKPVQGKLERFLADQQSEIDGLRARHERFKVDSEQQYFEVEKR
LAQSQERLVNETQECQTLRQELNKLNEQLKSLNEKNKELEAAHDRNTAIQSQLTRAKEEL
EGEKRDLVRTSERRSQEIEHLNEDVKRLNEKLTEANTAKVELQLKLDELQTSDVSVKYRE
KRLEQEKELLQNQNTWLHTELKAKTDELLLIAREKGNEILELKCSLENKKEEVSRMEEQV
NSLKLSNENLQKHVEDLLTKLKEAKEQQAGMEERFHNELNAHIKLSNLYKSAADDSEAKS
NELTRAVEELHKLLQEAGEANKATEDHLAEMEESKTAMEKELREKISKLEKELENANDLL
SATKRKGAILSEEELTAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLLLEKRENKRIN
KYLDEIVQEVEAKAPILKRQREEYERSQKAVASLSAKLEQAMKEIQRLQEDTDKANKHAS
VLERENQRLEIQVKDLSQQVRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
KNIEELQQQNQRLLVALRELGEAREKEEQETTSSRISELQSQLEEAIHELEKLREARHVQ
LQLVDSIVRQRDMYRVLLAQTTGVVIPVQASSMLPEEISFTSTPKRSSMPQAMSTPAPVS
MTESAEAVEAKAALKQLREVFENYRKEKAENDKLLNEQNEKLQEQVTDLRSQNAKMSTQL
EFASKRYEMLQDNVEGYRREITSLQERTQKLTATTQKQEQIINTMTQDLRGANEKLAMAE
VRADNLKKEKDILKMAEVRLTQQRESLLAEQRGQNLLLTNLRTIQVILERSETETKQRLN
NQVEKLEREISQLKKKLENEVEQRHVLTKNQDVHLLDTKRQLETEMNRHLNTKELLKNAQ
KEIATLKQQLNNTEAQLASQTSQQTPGKGQSSANEDVDDLVSRLRQAEEQVNDLKERMKT
TTSNVEQYRAMVLSLEESLNKEKQVTEEVRATVEARLKDSSEYQAQLEKKLMEAEKEKQE
LQDEKRKAIENMEQQLSELKKSLSNVQSEVQEALQRASTAINNEQQARRDCQEQAKIASE
AQNKYERELMLHAADVEALQAAKSQVAKNSAIRQQLEEATQKAESTLLECKASWEERERM
LKDEASKLGSRCDDLEKQNRLLHEQLENLSDKMVTSVKESMPSALNVSLNEEGKSQEQIL
EILRFIRREKEIAETRFEVAQVESLRYRQRVDHLERELQELHDSLNAEREKVQITAKTIA
QHEELMKKTETMNVLIETNKMLREEKERLEQELQQMQAKVRKLEADILPLQESNAELSEK
SGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDLEEYRKLLSEKEANTKRIQQMSEETGR
LKAEIARSNASLTTSQNLVQTLRDELSKIRTEKDTLQKELENKVADIQEKVKTITQVKKI
GRRYKTQYEELKAQYDKVVAETSTQSYAEEQEQQASVQEIQELKESLSQAEVKTKALENQ
IENLQKTIAEKESEARSLQEQISQLQSELSRLHQDLQERTTQEEQLRQQITEKEEKTRKT
LLAAKQKIAQLAGTKEQLTKENDEWKQKSSALEEQKTELEVRMSALKSQYEGRICRLERE
LREQQERHHEQRDEPPESTNKVPEQQRQITLKSTPASGERGIASTSDPPTANIKPTPVVS
TPSKVTATAIPGSKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPVE
HVPVFGSTSGSVRSTSPNVQTSLSQPILTVQQQTQATAFVQPTQQSHPQIEPATQEPPPT
IVDVVQSSQIERPSTSTAVFGTVSATPSSSLPKRPREEEEDSTVENSEQISEETVDIPLP
KKLRSVQRVGPEEEVTAEESTDGEVETQIYNQDSQDSIGEGVTQGEYAPMEDSEETSQSL
PIDLGPLQSDQQNTSSSQDGQSKRDDVIVIDSDDEEDDDEENEGEQEDYEDEEEEDEDDD
EDTGMGDEGDDSNEGTGSADGNDGYEADDAEGADGTDPCTETEESMGGGESNQRAADSQN
SGEGSTSAAESTFSHESSREQQPTSASERQAPRPPQSPRRPPHPLPPRLTIHAPPQELGP
PVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSP
QVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPL
QVAAPVTVFTESTSADPSEHASQSVPMVTTSTGSLSTTTESGVGDDGDEVFVEAESEGIT
SEAGLEIDSQQEEESVQASDESDLPSTSQDPPSSSSADTSSNQPKPFRRVRLQPPTLRTG
VRGRQFNRQRGVTHAMGGRGGLNRGNIS
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgctgcagcagctcctggagcgggccgagctggccaagctgcccaagccg
gtgcaggggaagctggagcgcttcctggccgatcagcagagcgagatcgacgggctccga
gccaggcacgagcgctttaaggtggacagcgaacaacagtattttgaagtggaaaagcgt
ctggctcaaagtcaagagagacttgtaaacgagacacaggaatgtcagactctccgtcag
gagctaaacaaacttaatgagcagttgaagtcattgaatgagaaaaacaaagaacttgaa
gcggctcatgatcgcaatacagccatacagagtcagcttactagagcaaaagaagaattg
gaaggtgaaaagagagatttggttcgaacgagtgagagacgctctcaagaaattgaacac
ttaaatgaggatgttaaacgtctaaatgagaaacttacggaagcaaacacagcaaaagtg
gagctacaattaaagctggatgagcttcaaacatccgatgtctctgtcaagtatcgtgag
aaaaggttggagcaagaaaaggaattattacagaatcagaacacgtggctgcacactgag
ttgaaagccaaaacagatgaactcctgcttattgccagggaaaagggaaatgaaatcctt
gagcttaaatgtagtctggagaacaagaaagaagaggtttccagaatggaggagcaggta
aacagcttaaaattgtcaaatgaaaatttacagaaacatgtggaagatcttttgactaaa
ttgaaggaggcaaaagaacagcaagctggtatggaagaaagattccataatgaactaaat
gcccacataaagttatctaacttgtacaagagtgctgcagatgattcagaagcaaagagt
aatgagctgacacgagcagtagaggagctgcacaaacttttgcaagaagcaggtgaagct
aacaaagcaacagaggatcatttggctgagatggaggagtctaaaactgcaatggaaaaa
gaactcagagagaagattagcaagttagagaaagaactggagaatgctaatgatttactt
tctgctacaaaacgtaaaggagctatactgtctgaggaagagctgacagctatgtctcct
actgctgcagcagtagccaaagtggtgaaacctggaatgaagttaaccgagctttacaat
gcgtatgtggaaacacaggatcagctacttctggagaagcgggaaaataagagaattaat
aagtatttggatgaaatagtacaggaagtggaagccaaagcaccaattttaaaacggcaa
cgtgaagagtatgaacgatcacaaaaagctgtagccagtttgtctgctaagcttgaacaa
gctatgaaggaaattcagcgattgcaagaggacactgataaagccaataagcatgcttct
gtactggaaagagagaaccaaagactggaaatacaagtgaaagacctttcacagcaggtg
agagtgcttttaatggaacttgaggaagccagaggcaatcatgtaattcgtgatgaagaa
gtgagctctgctgacataagtagctcttctgaagtaatatcccagcatctagtgtcctac
aaaaatattgaggaacttcagcagcagaatcagcgtctcttggtggctcttcgggagctt
ggggaggctagagaaaaagaggaacaagaaacaacttcatctagaatttctgagctgcag
agtcaacttgaggaagcgatccatgagttagagaaactgcgtgaagcacgtcatgttcaa
ctgcagcttgtagactctatagttcgtcagcgtgatatgtaccgcgtactgttagctcag
acaactggagttgtcattccagtgcaagcttcaagtatgttgccagaggagatttctttt
acatcaaccccaaaacgttcaagtatgcctcaggccatgtcaactcctgctccagtatca
atgactgagtcagcagaggcagtagaggctaaggctgcacttaaacagctgcgggaagtt
tttgagaactacagaaaagaaaaggcagagaatgacaaactgctaaatgaacaaaatgaa
aaacttcaggagcaagtcacagacttgcggtcacagaatgctaagatgtccacccaactt
gaatttgcctccaaacgttatgagatgctgcaggataatgttgagggatatcgtcgagaa
ataacatcccttcaggagagaactcaaaagctcacagcaacaactcaaaaacaggaacag
ataattaacaccatgacccaggacttaagaggagctaatgaaaagctggctatggcagag
gtgagagcagacaacttgaaaaaagagaaggatatcttgaagatggctgaagttcgtctg
acccagcagcgagaatctttattagctgagcaaaggggacaaaatttactgcttactaat
ctgcgaactattcaggtgatactggagaggtccgagacagagactaaacaaagactcaac
aaccaggtagagaaactagaacgtgagatatctcaactaaagaagaaactagagaatgag
gtggaacaaaggcacgtgcttaccaaaaaccaagatgttcatctgttggatactaagagg
caacttgagactgaaatgaaccgtcaccttaacacaaaggaactgctgaagaatgcccaa
aaagagattgccacattgaaacagcagctgaataatactgaagctcagttagcctcccag
acatcgcagcagactcctgggaaaggacagtctagtgcaaatgaggatgtggatgatctt
gttagtcgattaagacaagctgaggaacaagttaatgacctgaaggaaagaatgaagact
actactagtaatgtggaacagtacagagctatggttcttagtctagaagaatcccttaat
aaagaaaaacaggtgactgaggaagttcgtgcaactgttgaagcccgtttgaaggattct
tctgagtatcaagcccagctagaaaagaagttgatggaggcagagaaggaaaagcaagaa
cttcaggatgagaaacgtaaagctatagagaacatggagcaacagctatctgaactgaag
aagagtctctctaatgtgcaatctgaagtccaggaagctcttcaaagagcaagcacagca
ataaataatgaacagcaagccaggcgtgactgtcaggaacaagcaaagatagcttcagaa
gctcaaaataagtatgaacgggaattgatgcttcatgcagctgatgttgaggccttgcag
gctgctaaaagtcaagttgctaagaattcagcaataaggcagcagttagaggaagctact
cagaaagctgaatctacacttctggagtgcaaagcctcatgggaggagcgggagagaatg
ttaaaggatgaagcttcaaagcttgggtctcgctgtgacgacttagaaaaacaaaaccga
ttattacatgagcaactggaaaatctaagtgacaagatggtgacctctgtgaaggaatcc
atgccaagtgcattgaatgtttctctcaatgaagaaggcaaatcacaagaacaaatctta
gaaattctcagatttatacgccgagagaaggagattgcggaaacaaggtttgaggtggcc
caggtggagagcttgcgttatcgtcaaagggtggatcacctggaaagggagctccaggag
ttgcacgatagtctgaacgcagagagagaaaaggtgcagataacagcaaaaacaattgct
cagcatgaagaactaatgaaaaagacggaaaccatgaatgtgttgatagaaactaacaag
atgctgagagaagagaaagagaggctagaacaagaactacaacaaatgcaggcaaaggtg
cgtaagctagaggcagacatcctacctttacaagagtctaatgctgagctaagtgaaaaa
agtggaatgcttcaggcagaaaagaagctgttggaagaggatgtcaaacgttggaaagcc
cggacccagcatttactgagccaacagaaagacactgatcttgaagaatatcggaaactc
ctttcagagaaggaggcaaataccaaacgcatacaacagatgagtgaagaaacaggcagg
cttaaagcagaaatagcaagatctaatgcatctctgactacaagccagaatctggtccag
accctcagagatgagctatctaaaataagaactgaaaaggacactcttcagaaggagtta
gagaataaagtggctgacatacaagaaaaagtcaaaactataacacaggtcaagaaaatt
ggacgacgatacaagactcagtatgaagagctgaaagcacaatatgacaaggtggttgct
gagacatcaacacagtcttatgcagaagaacaagaacagcaagcttctgtccaggaaata
caagaactgaaagagtctctcagccaggctgaggtaaagacaaaagccctggagaatcag
attgaaaatttacagaagactatagcagagaaagaaagtgaagccagaagtcttcaggaa
cagatatctcagctacagtcagaactttctcgtcttcatcaagatttgcaagagagaaca
acacaggaagaacagctcaggcagcagataactgagaaggaggagaagactaggaagacc
ctgctggctgccaagcagaaaattgcacagttagctggtacgaaagaacagctgacaaaa
gaaaatgatgagtggaaacaaaagagtagtgcattagaagagcaaaagactgagttggag
gtgcggatgagtgcactcaaatcacagtatgaaggtcgcatttgccgcctggagagagag
ctaagagagcaacaagagaggcaccacgaacagcgagatgagcctccagagtctactaat
aaggttccggaacagcagaggcagattacacttaaatctactccagcgtcaggtgaaaga
ggaattgctagcacttcagatcctccaacagcaaacattaagccaacacctgttgtgtca
actccaagtaaagtgactgctactgccatacccgggagtaaatctactccaagagcaagt
atccgtccaatggttactcctgctacagttacaaatccaaccactactccaacagctaca
gttatgcctacaacacaggtggaaacccaagaagctatgcagtcagaaggaccagtagag
catgttccggtctttggaagcacaagtggatctgtacgctccaccagtcctaatgtccag
acatctctctctcaacccatcttaactgttcagcaacagactcaagctacagcttttgtg
cagcccactcagcaaagtcatcctcagattgagccagcaactcaagagccaccccccacc
attgtagacgtcgtacagagctcacagatagaaaggccctccacttccacagcagtgttt
ggtacagtttcagctaccccaagttcttccttgcccaagcgtccacgagaggaggaagag
gatagcacagtagaaaactcggaacaaatttcagaggaaacagtggatatacctcttcca
aagaaactgagaagcgtacagagagttggacctgaggaggaagtcacggcagaagaaagc
actgacggtgaggtagaaactcaaatttacaatcaagattctcaagactccattggagaa
ggggtcacccagggagagtacgctcccatggaagacagtgaagaaacatctcagtccctc
ccaatagatcttggacctcttcagtccgatcaacagaatacctcatcgtcccaggatggc
cagtccaagagagatgatgtcattgtgattgacagcgatgacgaagaggatgatgatgag
gaaaatgaaggcgagcaagaagattatgaagatgaggaagaggaggatgaagatgatgat
gaagatacaggaatgggggatgaaggtgatgacagtaatgaaggaactgggagtgctgat
ggcaatgatggatatgaagcagatgatgctgagggtgctgatggtacagatccttgtaca
gaaactgaagagagcatgggaggtggagaaagcaaccagagagcagcagactctcaaaac
agtggcgaaggaagtacaagtgctgcagagtccactttctcccatgaaagttcaagagaa
cagcagccaacatctgcctcagagaggcaggctcctcggccacctcagtcaccacgcaga
ccaccacatcctctacctccacgactgactattcatgctccaccccaggaactgggacca
ccagtacagagaatccagatgactcggaggcagtcagtgggacgtgggcttcaactaact
cctggtatagggggcatgcagcaacacttttttgatgatgaagacaggacagttccaagc
accccaactcttgtggtaccacatcgtacagatggatttgcagaagcaattcattccccc
caggttgctggagttcccagattcaggtttgggcctccagaagatatgccacagactagt
tccagccactccgatcttggccaacttgcatcacaaggaggtctaggaatgtacgaaaca
ccactcttccttgcccatgaagaagaatctggtggccgcagtgtcccaacaactccgctg
caagttgcagcaccagtgactgtttttactgaaagtacctcagctgatccttcagagcat
gcttctcagtctgttccaatggtgacaacatccactggcagtttatccactactactgaa
tctggagtgggtgatgatggggatgaggtttttgtggaggcagaatctgaaggaattaca
tcagaagctggtctagaaattgatagccagcaagaagaagaatctgttcaagcatctgat
gagtcagacctcccttccaccagtcaggatcctccttccagctcatcagcagacacaagc
agtaatcagccaaagcctttccggcgtgtcagacttcagccaccaacattaagaactggt
gtccgtggtcggcagtttaacagacagaggggtgtaactcatgcaatgggaggcagagga
ggcctaaacagaggcaatattagttaa
DBGET
integrated database retrieval system
