KEGG   Trachemys scripta elegans (red-eared slider): 117881338
Entry
117881338         CDS       T07347                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tst03036]
    117881338 (KDM4A)
Enzymes [BR:tst01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     117881338 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     117881338 (KDM4A)
Chromosome and associated proteins [BR:tst03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117881338 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN PHD DUF7141 LBR_tudor Tudor_5 DUF4537
Other DBs
NCBI-GeneID: 117881338
NCBI-ProteinID: XP_034634356
LinkDB
Position
8:complement(107762899..107803644)
AA seq 1061 aa
MAAEPESPNPSARIMTFRPSAEQFRDFSRYVAYIESQGAHRAGLAKVIPPKEWKPRTCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYEKHVHEWNIGRLNTILDVVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPLILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTAIDHTLPTPEAAEFFKGELLQ
KVKNGKQCSEEIETGEACKEDVDMDEKKSLPKHRIGTKRHRVCLEVPQEVSQSEAFPKEE
LSSVQYEVEVAEPPVRPTSELVQQGEDGLPVSDYVDSSEVKFEELKNVKLEEEEEEEEQE
AAALDLSIPHSVNSTSAFTASKPSSAFSLQPSSPAESTSSDSESAELLPRRTLGQATVLT
VHSYAKGDANGADSEHASGKKASTTASVNERELAEVAKEYMRSMKESKKSKGRRQPLSKL
PRHHPLVVKDCISDDEMSEQLTPEEEAEETEAWAKPLSQLWQNRPQNFEAEKEYNQTMAQ
QPPHCAVCMLFQTYQAECGGHGQSPGVAPGTATRKVRTKPLIPEMCFTATGCSTDLNLST
PYLEEDGTSVLITCKNCSVCVHASCYGVSPDKATEDWMCSRCTANALEEDCCLCSLRGGA
LQRANDDKWVHVMCAVAVLEAKFVNIAERSPVDVGKIPLQRFRLKCIFCKKRRKRIAGCC
VQCSHGRCPTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPSQAERAKAALQDLSAGQ
MVISKHKNGRFYQCEVVNLTKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVV
QVRWTDGQVYGAKFVASHAIQMYQVEFEDGSQLMAKRDDVYTLDEELPKRVKSRLSVASD
MRFTEIFTEKEVKQERKRQRVINSRYREDYIEPALYRAIME
NT seq 3186 nt   +upstreamnt  +downstreamnt
atggccgcggagccggagagcccgaaccccagcgcccgcatcatgacgttccgccccagc
gccgagcagttccgggacttcagccgctacgtcgcctacatcgagtcccagggcgcgcac
cgggccgggctcgccaaggtaattcccccaaaggagtggaaaccgcgaacatgctatgat
gatattgatgaactggtcatcccggctccaattcagcaggtggtgactggacaatctggc
ctcttcacacagtataacatccagaagaaggctatgactgtccgggaatttagaagaatt
gcaaatagtgacaagtactgcacacctcgatatacggactttgaggaccttgagcggaaa
tattggaagaacctcactttcaatgcccccatctatggtgctgatgttaatggcacactc
tatgagaagcatgtacatgagtggaatattggcaggttgaacacaatcctggacgtagtg
gagaatgaaagtggcataaccattgagggagtgaataccccttacctctacttcggcatg
tggaaaacctcctttgcctggcatactgaggacatggacctctatagtattaattacttg
cactttggagaacccaagtcatggtattccatccctccagagcatgggaagcgactggag
cgacttgccaaaggcttctttccaggaagtgcccagagttgtgaagcttttctccgtcac
aagatgaccctcatctctccattgatattgaagaaatatggcatcccatttgataaggtg
acacaggaagctggagaattcatgataacattcccttatggttatcatgctggctttaat
catgggtttaattgtgctgaatctaccaactttgctactcttcggtggattgaatatgga
aagcagtctgtgttatgctcgtgtcggaaggatatggtgaagatctccatggatgttttt
gtgaggaaataccagccagatcgctacaagctctggaaagcagggaaagatgtgactgcc
attgaccacactcttcccacaccagaggcagcagagttcttcaagggggagctcctccag
aaagtcaagaatgggaagcagtgcagtgaggaaatagaaactggggaggcatgtaaagag
gatgtggacatggacgagaagaagagtctgcccaagcatcgcataggaaccaagaggcac
agggtctgcctcgaggtgccccaagaggtgagtcagagcgaagcctttccgaaggaggag
ctgagctctgtgcaatatgaggtggaagtggcagagcctcctgtcagacccactagtgag
cttgtgcagcagggcgaagatggactcccagtttcagattatgtggattcttcagaagtc
aaatttgaagaactgaaaaatgtgaaactggaggaggaagaagaggaggaagagcaagag
gcagctgccctggatctttccattcctcattcagtcaattccacctcggccttcactgct
tctaagccgagttcagctttcagccttcagcccagctctcccgcagagtctacttcttcc
gactcggagtcagctgagctattgccccgacgaacgctcggccaggccacggttcttact
gtccatagctatgctaaaggagatgccaatggcgctgacagtgaacatgcttcagggaag
aaagccagcactacagccagtgtgaatgaacgggagcttgcagaggtggcgaaggagtac
atgagatcaatgaaagaaagtaaaaagtcaaagggtcgtcgccagcccttgagcaaactt
cctcgtcatcatcctcttgtggttaaagactgcatcagtgatgatgagatgtcggagcaa
ctgactcctgaagaagaggctgaggaaacagaggcttgggccaaaccacttagccagctg
tggcagaatcgccctcagaattttgaggcagaaaaagaatataatcagaccatggctcag
cagccccctcactgtgctgtatgcatgctcttccagacctaccaggcagaatgtggaggc
catggtcagagccctggagttgctccaggtactgccaccaggaaggtacgaaccaaacct
ctgattcctgagatgtgcttcactgcaactggctgcagcactgacctcaatctctcaacc
ccttacctggaggaagatggaacaagtgtcctgatcacctgcaaaaactgcagtgtctgt
gttcatgctagttgttatggtgtgtcccctgacaaggccactgaagactggatgtgctcc
aggtgtacagccaatgctttagaggaggactgctgcttgtgttcattacgaggaggtgcg
ctgcagagagccaatgatgacaagtgggtccatgtgatgtgtgctgtagctgtactggag
gcaaaatttgtgaatattgcagagcgcagtccagtggatgttggcaaaatccccctgcag
cgcttcagactgaaatgcatcttctgtaagaagcggaggaagagaattgcaggttgctgt
gtgcagtgctctcatggtcgctgtcctacgtcctttcatgtcagctgtgctcaagcagct
ggagtcatgatgcaacctgatgactggccatttgttgtcttcattacctgctttaggcat
aagattccatcccaggcagagcgagctaaagctgctctgcaggatctctcagctgggcaa
atggtcatcagcaagcacaagaacggtcgtttctatcagtgcgaagtggtcaatcttaca
aaggaaaccttctatgaagtcaactttgatgatggctccttcagcgataacctctatcca
gaggacattgtgagtcgagactgtcttcagctgggtcctcctgctgaaggagaagtcgtg
caagtcagatggacagatggacaagtctatggagccaaatttgtggcctcacatgccatc
cagatgtaccaggtggaatttgaagatggatcccagctgatggcgaagagagatgatgtg
tacacccttgatgaggagcttccaaagagagtcaaatcaaggctgtcagtagcttcagat
atgcgcttcacagaaatcttcacagagaaggaggtcaaacaagagcggaagagacaaaga
gtgatcaactcacgctatcgggaggattacatcgaacctgcactgtaccgggccatcatg
gagtaa

DBGET integrated database retrieval system