Trachemys scripta elegans (red-eared slider): 117881354
Help
Entry
117881354 CDS
T07347
Symbol
HCFC2
Name
(RefSeq) host cell factor 2 isoform X1
KO
K27390
host cell factor 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117881354 (HCFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117881354 (HCFC2)
03029 Mitochondrial biogenesis [BR:
tst03029
]
117881354 (HCFC2)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
117881354 (HCFC2)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
117881354 (HCFC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
117881354
NCBI-ProteinID:
XP_034634393
LinkDB
All DBs
Position
1:complement(97591291..97614187)
Genome browser
AA seq
800 aa
AA seq
DB search
MAAAAAAAAALSWRRVPSSTGPVPRSRHGHRAVAIRELVIIFGGGNEGIADELHVYNTAT
NQWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNDLYELQASRWLWKKVKPQ
PPSIGSLPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNIPRYLNDFYELELQHGSGVVG
WSVPMTKGILPSPRESHTAIVYCRKGLGNPKMYIFGGMCGCRLNDLWELDIETMTWSRPE
TKGTVPLPRSLHTANVIGNKMYVFGGWVPQTVEDEISARDGEWKCTSSFSYLNLDTTEWI
GLISDCQEDKKNLLPGPRAGHCAVAVGTRLYIWSGRDGYRKAWNNQVCCKDLWYLDTEKP
PAPSQVQLIRATTNSFQVKWDEVPTVEGYLLQLNADSPAPTVTGGTVVPETALLNSQGIK
LDLHSQTNHMVPNHVQVTSNSLLKLEAKENITEPENIVTQEATKKNHLDSRGFKESNAPS
LLPACTLGPQTSANVAELHDLDIRTVNPDASVSSTVSSTQTMVTQQAVKTESSSTNGAVV
KDETSLTTFSSKSEVAETTFIMPSTKVSTGHTNNSTVHLSKTTPLRQMATVKTRERQWYD
VGIFKSNSALVSQYYLLPEEKLSISNKVENADVPDYSSLKKQDLFPGTVYRFRVAAINGC
GVGPFSKVSEFKTCIPGFPGAPSTVRITKSVDCIHLSWEPPVSLSGNILEYSAYLAIRTT
QVHENPNQLVFMKIYCGLKTSCMVTAAQLSNAHVDYTSRPAIVFRISAKNERGYGPATQV
RWLQGKVDTKCSVKWDLSVL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgccgccgctgctgctgccctgagctggaggcgggtcccttcgtccacc
gggccggtgccccgctcccgccacgggcaccgcgccgtggccatccgcgagctggtgatc
atcttcgggggcggcaacgagggcatcgccgacgagctgcacgtctacaacacggctaca
aatcagtggtttcttcctgctgttagaggagatattcctccaggctgtgcagcccatgga
tttgtctgcgatggtaccagaatattagtgttcggaggaatggttgaatatggaagatac
agtaatgatttatatgaattacaggcaagtcgatggctgtggaaaaaagtaaaacctcag
cctccatctattggttcactaccttgtcctcgacttggccacagcttttctttatatggt
aacaagtgttatttatttggtggcctggcaaatgaaagtgaagattcaaacaataacatt
cccagatatttaaatgatttctatgaactggagctgcaacatggttctggagttgtagga
tggagcgttccaatgaccaaagggatcttgccttctcctcgagaatcccacacagccatt
gtgtattgcagaaaaggtttgggaaatccaaagatgtatatttttggagggatgtgtggc
tgtcgacttaatgacctttgggagcttgacatagaaacaatgacctggtcaagaccagaa
actaaggggacggtgccacttcctcgcagtctccatacagccaatgtaataggaaacaaa
atgtatgtttttggtggatgggttccacagacagtggaggatgagatttctgctcgtgat
ggtgaatggaaatgtaccagttcattttcttatctaaatttggacaccacggaatggata
ggtctaatctcagattgtcaggaagacaaaaagaacttgttacccgggccaagagctgga
cactgtgctgtggcagtcggcactcgtctgtacatctggagtggtagagatggttacaga
aaagcttggaacaatcaagtttgctgcaaagatctttggtatttagatacagagaaacca
ccagcaccatcacaggtacagctgatcagagctacaactaattcttttcaagtaaaatgg
gatgaagttcctacagttgaaggatatcttcttcagttaaatgctgactccccagcgcct
acagtgacaggtggaactgtggttcctgagactgcactgctgaattcacaaggaatcaag
ctggatcttcacagccaaacaaatcacatggttcctaatcatgtacaagttacatctaat
tcactactaaaactagaagctaaagaaaatattactgaacctgaaaacattgttacacaa
gaagctacaaagaaaaaccatctagattctagaggattcaaagagtcaaatgccccctcg
cttttgccagcgtgcaccttaggtcctcagacttcagcaaatgtagctgaattacatgac
ttggacatacgaactgtaaatcctgatgcttctgtatccagtactgtctccagcacacaa
actatggtaacccagcaggctgttaaaactgagtcatcaagtacaaatggggcagttgtt
aaagatgaaacttcactaacaacattcagttcaaaatctgaagttgctgaaactactttt
ataatgccttcaaccaaggtcagcactggtcacacaaataactcaactgtgcacttatct
aaaactactccactaaggcagatggcaacagtgaaaacaagagaacgacagtggtacgat
gtaggaatttttaaaagcaacagtgctttggtgagccagtactatttgttgccagaagaa
aaattaagcatctccaacaaggtggaaaatgcagatgttccagactacagttcacttaag
aaacaggatctctttccaggcactgtgtacaggttcagggttgctgcaattaatggctgt
ggtgtcggccctttcagtaaagtcagtgaatttaaaacctgcattccgggttttcctggg
gcaccttcaacagtcagaatcaccaagagtgtagactgtattcatctttcatgggagcca
cctgtttcactttctggaaatattttggaatattcggcttacttagctattcgtaccaca
caagtacatgaaaacccaaatcagcttgtatttatgaaaatatactgtggtcttaaaaca
tcatgtatggtgactgctgcacagctttcaaatgcccatgttgattacacctccagacct
gctatagtgttcaggatttctgcaaagaatgagagagggtatggaccagccacgcaagtt
cgatggcttcaaggtaaagtggataccaaatgtagtgttaaatgggatttatctgtacta
tga
DBGET
integrated database retrieval system
