Trachemys scripta elegans (red-eared slider): 117881365
Help
Entry
117881365 CDS
T07347
Name
(RefSeq) protein transport protein Sec16B
KO
K20353
COPII coat assembly protein SEC16
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117881365
Membrane trafficking [BR:
tst04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117881365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
117881365
NCBI-ProteinID:
XP_034634405
LinkDB
All DBs
Position
8:complement(50983249..51029745)
Genome browser
AA seq
1028 aa
AA seq
DB search
MVRGITTTNRTSEQGLNCGQTHGWSTTTPAILAGQRTRSDQTPEQSIMKAVISLDHIQGK
AMRTPTGATHRQALGKTTLSEVITDPPKYCSMRECADPRHEDLYGRHMNYWDQNYYRDSR
HDQDTSPFGQNDVAQYRSKSYSSYEEKYISTPRQEQIGVEARGNCVEDASFQPYELPAPR
ELSRLVQYKESGLSSSSYELSQYMRDSPNQYDPDPSETWSPVQTEEVLLSTPHHVAPQKY
SLPHVPVCFGAGGQLVRVCPNSPADGQPALIEMHSLEVILHDTKEQEEMRAFPGPLVRED
LHKVDVMTFCQRKAAMSCDLETERGRDSALLWKLLVLLCRQNGSMVGSDTAELLMQDCKR
LEKYKRQEPVANLINLTNEEWPVQGSGTPDLLTGEIPPSMETPEQRVEKFTKLLFYGRKK
EALDWAMRSQLWGHALFLSSKMDLRTYSWVLSGFTSTLALNDPLQTLFQLMSGRIPQAAL
CCGDGRWGDWRPHLAVMLSNQVGDTELNHRAIVAMGDTLAGRGLIEAAHFCYLMANVPFG
HYGVKTDHIVLLGSDPSQTFVQFAKTESILRTEIFEYCQMLGHPKSFILSFQVYKLLYAA
RLADYGLTSQALHYCEGIGTALLDQTQASHPVLLEQVIKLAEQLKLSDPLLLERPEQEQN
LEPDWLVQLRARGQQWEKEGDLPNLASAQPELSRASGSTADRDLRHEFAQNPGYQHNLEF
QQYNPPAPERTGQYQPGLQENVSFPPGAYSRVEGSEQAIASVPPDAMQENRPTEVSFGAN
LSLEGISNDHSPQVYQPPGNAVRFQGRSQPFGVQKNILEQQSVLNARARTVSESSTISVE
EDALRPPEGTGEGVAVERPSTEGAEREEAKGSGFGWFSWFRSKPSKEVTPSRDVSGPAPV
SAALGSQEKDAPAPCPSPPPPATGASSSSSHPPRLLPASPSPLSRSSAMNEAKGLQGPNG
RESAAFPGAGGQADSHGPLSGPGGLLLAPSRGQVPLFNPAQVPQLSTAASLGLGQPKRLS
QRRYPAQP
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaggtattaccaccaccaacaggacctcagaacagggcctcaactgtggccag
acccatggatggagtaccaccaccccagctatcctggcaggccagaggaccagatcagac
cagactccagagcagagtattatgaaagcagttatctcactagaccatattcaaggcaag
gctatgaggacccctactggagctacccatcgccaagctctggggaagactacgctttca
gaggttatcacagaccctcccaagtactgcagcatgagagagtgtgcagatccaaggcac
gaagatctttatggcaggcacatgaattactgggatcagaactactacagagactcccgt
catgaccaggataccagcccatttgggcagaacgatgtggcacaataccgctcaaagagc
tacagctcctatgaggagaagtacatctctactcccaggcaggaacagattggggtggaa
gcccgggggaactgcgtggaggatgccagcttccagccatatgagctccccgccccacgt
gagctcagccggctcgtgcagtacaaggaatctggcctcagctccagcagctatgaactc
agtcagtacatgcgcgactctcccaatcagtacgacccagatccttcagagacctggagt
ccagttcaaacagaggaagtcttgctgtccactccgcaccacgtggcaccgcagaagtat
tccctccctcacgtgccagtgtgctttggagcaggaggccagctggtccgagtgtgccct
aactccccggctgatgggcagcctgccctcattgaaatgcacagcctggaggtaatcctt
catgacacaaaagagcaggaggagatgcgagccttcccagggcctctggtcagggaggat
ttgcacaaggtggatgtgatgacattttgccagcgcaaagcagccatgagctgtgatttg
gagactgagagaggcagagactcagccctgctctggaaactcttggtcctcctttgccgg
cagaatgggtccatggtgggctcagacacagctgagctgctgatgcaagactgcaagcgc
ctggagaagtataaaaggcaagagccagtggccaatctgatcaacctgaccaatgaagag
tggccagtgcagggctccgggacaccagacctcctcactggggagatcccacccagcatg
gagacaccagagcagagagtggagaaattcaccaagctcctcttctatggcagaaagaaa
gaagccctggactgggccatgagaagccagctgtggggtcatgccctattcctgtcaagc
aagatggacctgaggacctacagctgggttctatctgggttcaccagcacgctggccctc
aacgaccccctgcagactctcttccagctcatgtccggaaggatacctcaggcagctctg
tgctgtggggatggcaggtggggagactggagaccacacctggcagtgatgctgtccaac
caggttggggacactgagctgaaccaccgggccatcgtcgccatgggagacaccttggct
gggagagggttaatagaagctgctcacttctgctatctaatggcgaatgtcccttttggt
cactacggggttaagacagaccacattgtcttgctgggcagtgaccccagtcagacattt
gtacagtttgccaagacggaatctatcctaaggactgaaatctttgagtattgtcagatg
ctgggacatcccaaatccttcatcctctccttccaggtgtataaactcctttacgctgca
cgcctggcggactatggtctcacctcccaggccttgcattactgcgaagggattggcaca
gctctgctagaccagacccaggccagccatccggtgctgttagaacaggttatcaagctt
gcagagcagctgaagctctctgacccattgctactggaaagacctgagcaggaacagaac
ctggaacccgactggctcgtccagctccgagcccgaggccaacaatgggagaaggaaggc
gacctccccaacttggcatctgctcagccagagctctccagagccagcggatccacagca
gacagagatctccgtcatgagtttgcacaaaacccaggctaccagcacaacctagagttc
cagcagtataacccccctgctcctgagaggacaggccagtaccagccaggtctacaggag
aacgtgtccttcccgcctggtgcatattccagggtggaggggtcagagcaggccatagct
tctgtgccacctgatgccatgcaagagaatcgtcccacagaggtcagctttggggcaaac
ctctctctagagggaatttcaaatgaccattccccacaggtctaccagccaccagggaac
gctgtgaggtttcaaggacgctcccagccctttggggttcagaagaacattctggaacag
cagagtgtgttgaatgccagggcccgaaccgtctcagagagctccaccatctccgtggag
gaggacgccttgcgacccccagaaggcacaggcgagggagttgccgtagagcggccgtcg
acggagggggcagagcgagaggaggcaaagggctcagggtttggctggttcagttggttt
cgatcaaagccctccaaggaggtgacgccttccagagatgtgtccggccctgccccagtc
tctgctgcactggggtcccaggagaaggatgcaccagccccatgtccctctccccctcct
ccagccactggagcaagctcttcatcatctcaccctcctcgcctgcttccggcttccccc
agccctctctccagaagctcagctatgaatgaagctaaaggcttacagggccccaatggc
agggaatcagcagcctttcctggggctggaggccaggctgactcacatggccctctctct
ggtcctggtggtctccttcttgcccctagtagagggcaggtcccactcttcaatcctgct
caggttcctcagctctccactgctgcctcccttggacttggccaacccaagcggctctca
cagcggcgctacccagcccagccgtga
DBGET
integrated database retrieval system
