Trachemys scripta elegans (red-eared slider): 117881441
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Entry
117881441 CDS
T07347
Symbol
CYFIP2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04810
Regulation of actin cytoskeleton
tst05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117881441 (CYFIP2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117881441 (CYFIP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117881441 (CYFIP2)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117881441 (CYFIP2)
Factors involved in mRNA localization
Other mRNA localization factors
117881441 (CYFIP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
117881441
NCBI-ProteinID:
XP_034634611
LinkDB
All DBs
Position
8:complement(2952198..3027443)
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCNEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDTKKRINLSKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEEFHKQSFF
FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP
VGTNEFTAEQCFGDGLNWAGCSVIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEIFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcacgtcacgctggaagatgccttgtccaatgtggacctgctggaggagcta
ccgctgccagaccagcagccatgcatcgagccacctccctcttccatcatgtaccaggct
aatttcgacacaaacttcgaagacagaaatgcctttgtgaccggcattgccaggtacatc
gaacaggctacagtgcactctagcatgaatgaaatgctggaggaaggacatgagtacgca
gtgatgctttacacttggaggagctgctctcgggccataccccaggtgaaatgtaacgaa
cagccgaaccgggtggaaatttatgagaagactgtggaagttctggagccggaggtcacc
aagctgatgaagttcatgtatttccagcgcaaggctatcgagcggttctgcaacgaggtg
aagcgcttgtgccacgctgagagaaggaaggattttgtctccgaggcctatctcctgaca
ctggggaaattcattaacatgttcgccgtgctggatgagctgaagaacatgaagtgcagc
gtcaaaaatgaccactctgcctacaaaagagctgcccagtttttgaggaagatggctgac
ccgcagtctattcaggaatcccagaacctctccatgttcctggcgaaccacaaccggatc
acacagtgtctgcatcagcagctggaagttatccctggctacgaggagctgctggcggat
attgtcaacatctgtgtggactactatgaaaacaagatgtacttgacacccagcgagaag
cacatgctcttaaaggtgatgggctttggtctgtatctgatggatgggaatgtcagcaac
atttacaaactggacaccaagaagagaatcaatcttagcaaaatagacaagttcttcaag
cagctgcaggtggttcctttattcggcgatatgcagatagaactggccagatacattaag
accagtgctcactatgaggagaacaaatccaagtggacgtgcactcagagcagcatcagt
ccccagtacaacatctgtgagcagatggtccagatccgagacgaccacatccgcttcatc
tcggagctcgctcgctacagcaacagtgaggtggtcaccggctcggggctggacagccag
aagtcagatgaggaatacagggagctctttgacttggctttacgggggctgcagctgctc
tccaagtggagcgcacatgtcatggaagtgtattcttggaagctggtacatcccaccgat
aagttctgtaacaaagattgcccaggcaccgcagaggagtacgagagagccacccggtac
aactacaccagcgaggagaaatttgcctttgtggaggtaattgccatgatcaagggtcta
caagtgctgatgggccggatggagagtgtctttaaccaggccatcagaaacactatctat
gcagccctgcaagactttgcccaggtgactctccgggagcccttgagacaagcagtcagg
aagaagaagaacgtcctgatcagtgtccttcaggcaatccggaagacgatctgtgattgg
gagggaggtcgggagccccctaatgacccctgcctgagaggcgagaaggaccccaaaggt
ggattcgatattaaggtccctcgacgagcagtgggtccatcgagcacacagctttacatg
gtgcggaccatgctggagtcgctcatcgcagacaagagcggctcgaagaagactctgagg
agcagcttggatgggccgatagtcctggccattgaggagttccacaagcagtccttcttc
ttcactcaccttctcaacatcagcgaagccctgcagcagtgctgcgatctgtcccagctc
tggttccgagaattctttctggagctgaccatgggccgtcggatccagttccccatcgag
atgtccatgccctggattctcacggaccacatcctggaaaccaaggaaccctccatgatg
gagtacgtgctgtatcccttggacctatacaacgacagcgcatattatgccttaaccaag
tttaaaaagcagttcctatatgatgaaattgaagctgaagtgaacttgtgttttgaccag
tttgtgtacaagttggcagatcagatctttgcctattataaagcaatggctggcagtgtc
ttactggataaacgtttccgggctgaatgtaagaattatggcgtgattatcccatacccg
ccgtccaatcgctacgagacgttactcaaacagagacacgtccagctgctgggtagatca
attgacctgaacaggctcataactcagcgtatttcagctgcgatgtacaaatcgttagac
caagccattagccgctttgagagtgaagacctgacctccattgtggagctggagtggctc
ttggagataaatcgtctgacacaccggctgctgtgtaagcacatgactttggacagtttt
gatgccatgttccgagaggccaatcacaacgtctctgccccttatggacgcatcaccctg
cacgtcttctgggagctaaactttgactttctacccaactactgctacaatggctccacc
aaccggtttgtacggacagcgattccattcacccaggaaccacagagagacaagccagcc
aacgtccagccgtattacctctacggatcaaagccactgaacattgcctacagtcacatc
tacagctcctaccgcaacttcgtggggcctcctcatttcaagacaatctgccggctccta
ggctatcaagggatcgcagtggtgatggaggagctgctgaagatcgtcaaaagcctgtta
cagggcaccattctgcagtatgtgaaaacattgatagaggtgatgcccaaaatatgccgc
ttgccaagacatgaatatggatctccaggaatcttggagtttttccatcaccagctgaag
gacatcattgagtatgcagagctgaagactgatgtattccagagccttagagaagtgggc
aacgctattctgttctgcctcctcatagagcaggccctgtcccaggaagaagtttgtgat
ttgctgcatgctgctcccttccaaaatattttgcccagggtctacatcaaagaaggagaa
cgcttggaggtacgcatgaagcgtctcgaagccaaatatgccccacttcacctggttccc
ttaatagagaggctgggaactcctcagcaaatagccattgctcgggagggtgacttgctg
accaaggagcggctgtgctgcgggctctccatgttcgaggtgatcctgacgcgcattcgc
agctacctgcaggacccaatctggcgtggacctccccctaccaacggggtcatgcacgtg
gatgagtgcgttgagttccaccggctctggagtgccatgcagttcgtatactgcatcccc
gtggggacaaacgagttcactgcagagcagtgctttggagacggtttgaactgggcaggc
tgctccgtcattgttctcctcgggcagcagcggcgcttcgacctctttgacttctgttac
catctgctgaaggtgcagaggcaggatgggaaggatgaaatcatcaagaacgtgcccctg
aagaagatggctgaccgcatcaggaagtatcagattctgaacaacgagattttcgccatc
ctgaacaagtacatgaagtcggtggaaacagacagctccacggttgagcacgtgcgctgc
ttccagccccccatccaccagtccctggctaccacttgctaa
DBGET
integrated database retrieval system
