Trachemys scripta elegans (red-eared slider): 117881444
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Entry
117881444 CDS
T07347
Symbol
ASTN1
Name
(RefSeq) astrotactin-1 isoform X1
KO
K24479
astrotactin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117881444 (ASTN1)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117881444 (ASTN1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
ASTN1_2_fn3
Annexin_2
FXa_inhibition
ASTN_2_hairpin
EGF_Tme5
fn3
TM_ErbB1
MACPF
Motif
Other DBs
NCBI-GeneID:
117881444
NCBI-ProteinID:
XP_034634614
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Position
8:complement(50400589..50603305)
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AA seq
1303 aa
AA seq
DB search
MALARLCALLACCCWLPAAAAGAAEADEDPSKELECKLKSITVSALPFLRENDLSIMHSP
SASEPKLLFSVRNDFPGEMVVVDDLENTELPYFVLEISGNTEDIPLVRWRQQWLENGTLL
FHIHHQDGTPSLPGADPTEEPQTESAEEELRILHISVMGGMIALLLSILCLVMILYTRRR
WCKRRRVPQPQKSASAEAANEIHYIPSVLIGGHGRESLRNARVQGHNSSGTLSIRETPIL
DGYEYDITDLRHHLQRECMNGGEDFASQVTRTLDSLQGCNEKSGMDLTPVFALNSSCSGS
DNAKLSLMNKYKDNIIATSPVDSNHQQATLLSHTSSSQRKRINNKARAGSAFLNPEGDSG
TEADNDPQLTFYTDPSRSRRRSRVGSPRSPVNKTTLTLISVTSCVISLVCSSHMSCPLIV
KITLHVPEHLIADGSRFILLEGSQLDASDWLNPAQVILFSQQNSSGPWALDLCARRLLDP
CEHQCDPETGECLCYEGYMKDPVHKHLCIRNEWGTNQGPWPYTIFQRGFDLVLGEQPSDK
IFRFTYTLGEGMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAVEVREELMTSSSFDS
LEVLLDSFGPVRDCSKDNGGCSKNFRCISDRKLDSSGCVCPAGLSPMKDGTGCYDRHIGV
DCSDGFNGGCEQLCLQQMVPLLEDPSLYNILMFCGCIEDYKLGVDGRSCQLISESCPKGG
DCGESRELPMNQTLFGEIFYGYNNHSREVAAGQVLKGTFRQNNFARGLEQQLPDGLVVAT
VPLENQCQEQISEPTPDPGFLTGMVNFSEVSRYPLLQHWKVRSVMYHVRLNQLTISQSFS
NALHSLDGATSRGDFVALLDQFGNHYIQEAVYGFEESCSIWYPNKQVQRQLWLEYEDISK
GNSPSDESEERERDPKVLTFPEYITSLSESGTKRMAAGVRMECQSRGRCPSSCPLCHVTS
SPDTPAEPILLEVTKAAPIYELVTNNQTQRLLQEATMSTLWCSGSGDVIEDWCRCDSSAF
GADGLPTCAPLPHPVLRLSTVHEPSSTLVVLEWEHSEPPIGVQIVDYLIRQEKITDRMDH
SKVETETVLSLVDDIISGAKSPCAMPAQVPDKLSTTISLIIRCLEPDTTYTFTLWGVDNT
GRRSRSSDVTVKTPCPVVDDVKAQEIADKIYNLFNGYTSGKEQQTAYNTLLDLGSPSLHR
VLYHYNQHYESFGEFTWRCEDELGPRKAGLILSQLGDLSGWCNSLLQEPKISLQRTSLRY
LACRYSEIKPYGLNWSELSRDLKKTCEEQALSILSNDYGDKDN
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggctttagcccggctctgcgccctgcttgcctgctgctgctggctcccggctgccgct
gccggggccgcggaggcggacgaggacccgtccaaggagctggagtgcaagctcaagagc
atcacggtgtcggcgctgcccttcctgcgggagaacgacctgagcatcatgcacagcccc
tcggcctcggagcccaagctgctcttctcggtgcgcaacgacttccccggggagatggtg
gtggtggatgatctggagaacaccgagctgccctactttgtgctggagatctcggggaac
acagaggacattcccctagtgcgctggaggcagcagtggctggagaacggcacgttgctc
ttccacatccaccaccaagatggcacccccagcctgcctggtgctgaccccaccgaagag
ccccagactgagtcagcggaagaggaactaaggatcctccacatctccgtcatggggggc
atgattgccctgctgctctccatcctgtgcctggtgatgatcctctacacccgtcggcgt
tggtgcaagcggcgccgggtgccgcagccccagaagagtgccagcgcggaggcggccaac
gaaatccactacatcccctcggttctgattgggggtcacggacgggagagcctgcgcaac
gcccgcgtgcaaggccacaactccagcggcacgctgagcatccgcgagacccccattctg
gacggctatgagtacgacatcactgacctgcgtcaccacctgcagcgcgagtgcatgaac
ggcggcgaggacttcgctagccaggtcaccaggacgttggattcgctgcagggctgcaat
gagaagtctggcatggatctcacgccagtttttgccttaaattcttcctgctcaggaagc
gacaatgccaagctgtccttgatgaacaagtacaaggataacatcatcgctaccagcccc
gtggactccaaccaccagcaggctaccctgttgtctcacacctccagtagccagcggaag
cggatcaataacaaagcacgagctggctcagcgtttctgaaccctgaaggagattctggg
acagaggctgacaacgacccccagctaacgttttatacggacccatcccggagcaggcgg
cgcagcagagtgggctcgccgagaagtccggtcaacaagaccacgctgaccctgatcagc
gtcaccagctgtgtgatcagcctggtgtgctcatcccacatgagctgcccgctcatcgtc
aagatcaccctgcacgtcccggagcacctcattgccgacgggagccgctttatcctactg
gaaggcagccagctggatgccagcgactggctaaaccctgcccaagtcatcctgttctct
caacagaactccagtgggccctgggcactggacctctgtgcccgacgacttcttgacccg
tgtgaacaccagtgtgatccagaaaccggtgagtgcctttgctatgagggttacatgaag
gacccagtgcacaagcatctctgcatccggaatgagtggggcacaaaccaggggccatgg
ccatatacaatattccagcgtggatttgacttggtgctgggagagcagccttctgataag
atctttaggttcacctacaccctgggggaagggatgtggctgccactgagtaagagcttt
gtgatcccgccggccgaactggccatcaacccctcagccaagtgcaaaacggatatgacg
gtgatggaggatgcggtggaggtcagggaagaactgatgacttcctcctcatttgatagc
ctggaggttctcttagactcctttggaccggttcgggattgctccaaggacaacgggggc
tgcagcaagaatttccgctgcatctcggaccgcaaattggactcctccggttgtgtgtgc
ccagcaggtctcagccctatgaaggatggcaccggctgctatgaccgccacattggggtg
gactgttcagatgggttcaatggtggctgcgagcagctgtgtctccagcagatggtgcct
ctgctggaagatccctctctgtacaatatcctcatgttctgtgggtgcattgaggattac
aaacttggagtggatgggcggtcatgccagctgatctcggaatcctgcccaaagggaggt
gactgcggggagagccgggagctgcccatgaatcagactctgtttggggaaatattctac
gggtacaacaaccactccagggaggttgcagctggacaagtgctgaaagggaccttcagg
cagaacaacttcgcccggggcttggagcagcagcttccagatggcctggtggtggccact
gtcccgctggagaaccagtgccaggagcagatctctgagcccacacccgacccaggcttt
ctgactgggatggtgaatttcagcgaggtgtctcgatacccattgctgcagcactggaag
gtgcgttccgtcatgtaccacgtccggctcaaccagctgactatctcccagtctttcagc
aacgccctccactctctcgatggagccacctcccgaggcgatttcgtggccctgctagac
cagtttggcaaccactacatccaggaggcagtctatggctttgaggaatcctgctccatc
tggtatcccaataagcaggtccagcggcagctctggctggagtacgaagacataagcaaa
ggcaattccccctctgacgagtccgaggagcgagagcgggaccccaaggttctcaccttc
cccgaatacatcaccagcctgtcggagtcgggcaccaagcggatggcagctggggtccgc
atggagtgccagagcagaggccgctgcccctcctcatgcccgctttgccatgtgacttca
agcccagacacgccagccgagccaattctgctggaggtcaccaaagcagcgcccatctat
gagctggtcaccaacaaccaaacccagaggctgttgcaggaggccaccatgagcaccctg
tggtgttccgggagtggggatgtcattgaagactggtgccggtgcgactcgagtgctttt
ggcgccgacgggctcccaacctgtgcacccctcccacacccggtgctgcggctctccacg
gtgcacgagccgagcagcaccttggtggtgttggaatgggagcactcagagccgccaatc
ggagtgcagatcgtcgattacctcatccgtcaggagaagatcaccgaccgaatggatcat
tccaaagtggagaccgagacagtgctgagtttggtggatgacatcatctccggagccaaa
tccccctgtgcgatgccggcacaagtacccgacaagctgtccaccaccatctccttgatc
attcgctgcctggagcctgacaccacctacacgttcacgctttggggagttgataacacg
gggagacgctccaggtcaagtgatgtgacggtcaagaccccatgcccagtggtagatgat
gtgaaggctcaagaaatagcagacaagatctacaatctcttcaatggctacactagcggc
aaagagcagcagacagcttacaacactctgctggacctgggctcacccagcctgcaccgg
gtcctctaccactacaaccagcactacgagagcttcggggagttcacatggcggtgtgaa
gatgaattaggacccaggaaggccggcctcattctctcccagcttggggacctcagcggc
tggtgcaacagcctccttcaggagcccaagatcagcctccagcgcacgtcgctcaggtat
ctcgcctgccgctacagcgagatcaagccatacggacttaactggtcggagctgagccgg
gacctcaagaagacatgcgaagagcaagcgctaagcatcctctctaatgactatggagac
aaagacaactga
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integrated database retrieval system
