KEGG   Trachemys scripta elegans (red-eared slider): 117881459
Entry
117881459         CDS       T07347                                 
Symbol
PATJ
Name
(RefSeq) inaD-like protein isoform X1
  KO
K06092  InaD-like protein
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst04530  Tight junction
Brite
KEGG Orthology (KO) [BR:tst00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    117881459 (PATJ)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 L27_2 MPDZ_u10
Other DBs
NCBI-GeneID: 117881459
NCBI-ProteinID: XP_034634639
LinkDB
Position
8:complement(92430734..92644756)
AA seq 1901 aa
MPENPAADKQQVLQILDRLQMKLRERGETSQNENLTILCNTLRSPLFNQILTLQQSIKQL
KEQLNYMPSDRSVDFDFTKRGLLVFDADRSITNGNMYMAYNSSGPRVDPLNPKLGADEFN
MMIQQMAKGRQIEYIDIEKPSVGGLGFSVIALKNQTVGEAGIFVKEIQPGSIAARDQRLK
ENDHILAINHTPLDQNISHQQAIALLQQSTGSLHLVVARESVQRNSGASAVLSDTHPPET
IQWGHVEEVELINDGSGLGFGIVGGKSNGVVVRTIVPGGLADRDGRLRTGDHILQIGGTN
VQGMISEQVAQVLRNCGNSVRMVVARDPACEITVTPPTPLSLPVGALPFSPDKGANTTLF
DTYDVELTKKDGQSLGITIIGYTGTSDVADSSGIFVKNIIPGSAADHSGLIQVQDKIVAV
DGINVQDCSNQEVVEALRRTGQVVHLTLLRQKPSHASFSSGRSLEREQPNMPALVLSGAV
ETETNLDSEIEEDQEDKDNFENEKKQNLHKIGRDPDSPEKELKSKWGKLLGPDYEVMVVR
VDMPITDDAELQKYSKLLPLHTLRLGVELDTFDGHHYISSIAPDGPIAMLGLLQLEDELL
EVNGVQLYGKSRREAVSFLKEVPPPFTLVCCRRLFDDGGESFVDELSTIEVSSPEPKMKP
EVDLHPEEEGDGELALWSPDVKVIELEKDYKGLGFSILDYQDPLDPTRTAIVISSLVAGG
VAERGGELLPGDRLVFVNEKYLDNATLAEAVEVLKSVPPGTIRLGICKPLVGESKEEENF
CIVDPSTIEDHSASPAPINDIHSSIMLEAPQGFRDKTFFQEELVDEPLLDLGRPFQLAQN
ETEHKESWEMHEFLKAKMEEMGEEREMLVDEEYDVDPDYFTYASSHVKDTTPPAGKNLVS
IGEWAKQLEPTKTPDLRSLISTNAKQSPHYLYDDEETYEATVENNCQTAIFDDIEMTESV
AKSKLDLGTRLQNDSKRRRLVDLEAAERDEQKMEDYVLSRNQETGRAVTPAQPAAVLSSE
LPEREEGEGEETPNFSHWGPSRIVEIFREPHMSLGISIVGGQTIIKRLKNGEELKGIFIK
QVLEDSPAGRTKALKTGDKILEVSGVDLQNATHEEAVEAIKNAGNPVVFVVQSLSSTPRV
VSVVQSKINKTKKDQDTERENKNEKELPARSSSPTENQRKVGAPPPMKLPPPYKAPKRLQ
SEEDAVEKEDFYTEEKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFIVGI
NPDGPAGRDGRMHIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNGDAVNQMA
VTPFPLPSSSQSSIEDHSGTEHASSEEDCSSEVVMKSLTDDECIKMDVRNKAEKQMLMVD
QQDLVEQLPENVLNQLKQSKSSTKAPTSLHEISLAPTPSYLSPEAEFTSHSNVLPPLLPV
DPATCPIVPGQEMTIEISKGRSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGD
QILEVNGIDLRNASHEEAITALRQTPQKVQLVVYRDEAHYKDEENLEIFYVDLQKKTGRG
LGLSIVGKRNGSGVFVSDIVKGGAADLDGRLIQGDQILSVNGEDMRNASQEVVATILKCA
QGLVHLEIGRLRAGSWLSSRKTSQSSQVNQHSMHSHFHPALAPVITTLQNFVSTKRLSAD
ASQRNSVGADMDLRTVEIMRGPNDALGISIAGGKGSPLGDVPIFIAMIQASGVAARTQRL
KVGDRIVSINGQPLDGLSHADAVNLLKNAYGSIILQVVADTNISAIASQLESMSAGCNLN
SPTLDCHSEDPEAPQPKIIALEKGSDGLGFSIVGGHGSPHGDLPIYVKTIFAKGAAADDG
RLKRGDQILAVNGEALEGVTHEQAVAILKCQKGSVILTVLS
NT seq 5706 nt   +upstreamnt  +downstreamnt
atgcctgaaaatcctgcagcagataagcagcaggtgctacaaattcttgatcgtctgcaa
atgaaactgcgagagagaggggagacttcacagaatgaaaacctgactattttatgtaac
acactcagaagccctttgtttaatcagatactgactcttcagcagtccatcaagcaactg
aaggagcaactcaattacatgccttcagaccgttcggtggactttgattttactaagaga
gggttactagtatttgatgctgacagatccattactaatgggaacatgtatatggcttat
aattcatctggacccagagtagatccactcaatccaaaactaggagctgatgaattcaat
atgatgatccaacagatggcaaagggcaggcaaatagaatacatagatatagaaaaacca
tctgttggaggtcttggttttagtgtgattgcccttaaaaatcaaacggtgggagaagct
ggtatctttgtcaaggaaatccaaccaggaagcatagctgccagggatcagagattaaag
gaaaatgaccacattctggccattaaccacaccccgttggatcagaacatttcccatcag
caggctattgcactgctccaacaatccacaggatctttacatctggttgttgctagagag
tcagtccaaagaaacagcggagcctctgctgtcttaagtgacacacatccgcctgaaact
attcaatggggccatgttgaagaagttgaactgattaacgatggctcaggattaggtttt
ggaattgtaggaggaaaatcgaatggtgtggttgtaaggactattgttccaggcggatta
gcagatcgggatgggagactgagaacaggagatcacatcttacagattggaggaaccaat
gtacaaggaatgatcagtgaacaagttgcccaagtgctgagaaactgtggaaattctgtt
aggatggtggttgcaagagatccagcgtgtgagattactgtgacgccaccaacccctctg
agcctgcctgttggtgcattgcccttctctccagacaaaggtgctaataccactcttttt
gatacctatgacgtggagcttacaaaaaaagatggacaaagcctcggtataacaattatt
ggatatactggaacatctgatgtagcagattcttcagggatctttgtgaaaaatataata
cctggcagtgctgcagatcacagtggccttatacaagtccaggacaaaattgttgctgtt
gatgggattaatgttcaggattgctccaaccaagaagtggtggaggcgctgcgtcgcact
ggccaggtggtgcaccttaccttgcttcgacagaaaccttctcatgcttctttctcttca
ggaagatctttagagagagagcagccaaatatgccagccttagtcctgtctggagctgta
gagacggaaactaatttggatagtgagattgaggaggatcaagaggacaaagataatttt
gaaaatgaaaagaagcaaaatctacacaaaataggaagagacccagactctccagaaaag
gagttgaaatccaaatggggaaaactgctgggacctgattatgaagtcatggtggttcgt
gtggacatgccaattacagatgatgctgagctccagaaatactcaaagctattgcctctc
cacactttgagattaggagttgaacttgatacatttgatggacatcactacatatcttca
attgctccagatggtccaattgctatgcttggcctactgcaactggaggatgaacttcta
gaggtaaatggagttcagctttatggaaaatcccgccgtgaggcagtttcttttctgaaa
gaagtgccgcctccgttcactctggtttgttgtcggcgcctgtttgacgatggtggcgaa
tcctttgtggatgagctcagcaccatcgaggtttcgtctccggagccaaagatgaaacca
gaagtagaccttcatcctgaagaggaaggagatggtgaactagcattgtggtctcctgat
gtgaaagttattgaactagaaaaagactataaaggtttaggattcagcattttagattat
caggatcccctagatccaacaagaacggccattgtgatcagctctctggtagcgggtgga
gtagccgaacgcgggggtgaactgttaccaggcgaccgcctggtttttgtaaatgagaaa
tatttggacaatgccactctagcagaggcggtagaagtgttgaaatctgtgcccccaggt
actattcgccttggcatctgcaagcctttggtgggagaaagcaaagaggaagagaacttt
tgcattgtggatcccagcaccattgaagaccactctgcatctccagcaccaataaatgat
attcattcatcaataatgctcgaggcaccacagggttttagagataaaacattctttcaa
gaagaacttgtcgatgaaccacttctggatttgggaaggccgtttcagctagctcagaat
gaaaccgaacataaggagtcctgggaaatgcatgaattccttaaggctaaaatggaggaa
atgggtgaagagcgggaaatgttagtggatgaagagtatgatgtggacccggattatttt
acatatgcctcatcacatgtaaaggacacaactccacctgctgggaagaacctggtttct
attggagaatgggcgaagcaacttgagccaactaaaacaccagatttaagatcccttatt
agcacaaatgctaagcagtccccacattacctgtatgatgatgaagaaacgtatgaagcc
acagtggagaacaactgccaaacagccatatttgatgatattgaaatgactgagtcagta
gcaaaaagcaaactggatttaggtacgaggcttcagaacgactcaaaaagacgtaggtta
gttgaccttgaagcagctgaaagggatgaacaaaagatggaggattacgttctttccagg
aaccaggaaactgggagagctgtcactcctgctcagcctgcagcagtgttgtccagtgaa
ttacctgaacgagaagaaggagaaggagaagaaactccaaacttcagtcattggggacca
tcccgaattgttgaaatcttcagagagcctcacatgtctcttggaatcagtattgttggt
gggcaaactattataaagcgcctaaagaatggagaggaacttaaaggtatctttatcaaa
caagtcttggaagacagcccagctggaagaacaaaagccttaaaaactggggataaaata
cttgaggtgtctggagtagacttacaaaatgccacgcatgaggaagcagtggaagctatc
aagaatgcaggaaatcctgttgtttttgttgttcagagtttgtctagtaccccaagagtg
gtctccgtggtacagtctaagataaataaaaccaagaaagatcaggacacagaaagagaa
aacaaaaatgagaaggaactgccagctagatcctccagccccacagaaaatcagagaaaa
gtgggggcaccacctccgatgaagttgccacctccttataaagcacccaaaagactccag
tcagaggaggatgctgtggagaaggaggatttttatacagaggagaaaatcagacaaaga
tatgcagatctgccaggggagttgcacattattgagcttgagaaagataagaatgggctt
ggactcagccttgctggcaacaaggacaggtctcgtatgagcattttcatagttggcatc
aatccagatggacctgcaggaagagatggaagaatgcacattggtgatgaacttttagag
ataaacaatcagatattgtatggaagaagccaccaaaatgcctctgcaataattaagact
gctccgtcaaaggtcaagttggttttcatacgaaatggagatgcagttaaccaaatggct
gttactcctttcccattaccttcaagctcccagtcttccattgaggatcacagtggcact
gaacatgcaagcagtgaagaagattgcagctcagaagttgtcatgaaaagcttgactgat
gatgaatgtatcaaaatggatgtcagaaacaaagctgaaaaacagatgttgatggtagat
cagcaggatttggtggagcaacttccagaaaatgtcctcaatcaattaaaacaatccaag
tcttcaaccaaagcacccaccagtttacatgagatatctttggcaccaacaccttcttat
ctttctccagaggcagagttcaccagccatagcaatgtactgcctcctctgttgccagtg
gatccagccacatgcccaattgttccagggcaagagatgactatagaaatatccaagggg
cgatcaggtcttggtctcagcattgtaggagggaaagatactccacttgatgccatagtt
atccatgaagtttatgaagaaggggcagcagctagagatggtcgactctgggctggtgat
cagattcttgaggttaatggcattgatttgaggaatgctagtcatgaagaagctatcaca
gccttgagacagacacctcaaaaggtgcaactggttgtttatagagatgaagctcattat
aaagatgaagagaatttggagattttctatgtagatctacaaaagaaaacaggcagagga
ctaggtctaagcatcgttggaaaacgaaatggaagtggagtgtttgtttctgacattgtt
aaaggaggagctgcagacctggatgggagattaatacaaggagatcagatcttgtctgtt
aatggggaggatatgaggaatgcctcacaagaggttgttgccactatcctcaagtgtgct
caagggctagtgcacctagagattggaagactgagagctggttcttggttatcatcacgg
aaaacatcccaaagcagtcaggtgaaccaacacagcatgcatagtcactttcatcctgca
ctggctccggtcatcactaccttacagaactttgtcagcaccaagaggctgtcggcagat
gcatctcagagaaattcagtaggagcagatatggacctgaggactgtggagataatgagg
ggaccaaatgatgcccttggtatcagtatagcaggagggaagggaagcccattaggagat
gttccaatctttatcgccatgattcaagccagtggagtagcagcacgtacccaaaggctc
aaagttggagatcggattgtcagtattaatgggcaacctttggacgggctgtctcacgct
gatgctgttaatctactaaagaatgcttatgggagcattatcctgcaggttgtagccgac
accaatatcagtgccatagctagccaattagagagcatgtctgctggatgtaatcttaac
tcccctactcttgattgtcattctgaagatccagaggctcctcagcctaagattattgct
ttggagaaaggttctgatggcctgggttttagtattgtagggggacatggaagtccccat
ggagacctgcccatttatgtcaagactatatttgccaagggagcagctgcggatgatggc
agattgaagcgcggtgatcagattttagcagttaatggagaagctttggaaggtgttact
catgagcaagctgtagctattctgaaatgccagaaaggatctgtgatattaacagtgtta
tcatga

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