Trachemys scripta elegans (red-eared slider): 117881522
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Entry
117881522 CDS
T07347
Symbol
RNF130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117881522 (RNF130)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117881522 (RNF130)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117881522 (RNF130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
SP24
zf-ANAPC11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
117881522
NCBI-ProteinID:
XP_034634778
LinkDB
All DBs
Position
8:7078526..7147754
Genome browser
AA seq
408 aa
AA seq
DB search
MMLAKWTSQYWDRLSSLPVLVLVNCCVLLASADNASQAYYTALINVTVLNPDRVSPTLLR
IDRGRYGQDSPKVEVKGLLLAPVPINGVVDRLGCDPRTRFHVPPNTKQWIALLQRGNCTF
REKILRAASHNATAVVIYNNISSEEPVTMTHQGTGDIVAVMITESKVKEILNYLEKNISV
LMAIAVGARVPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQVRCP
LLLSETDPDFDHCAVCIECYKQNDVVRILPCKHVFHKACVDPWLSEHCTCPMCKLNILKA
LGIVPSVPCTDNVAFDMERLTRGQPANRRSALGDFANDNSLSLEPLRTSGMSQLPQDGEI
TPRTGEINIAVTKEWFIIASFGLLSALTLCYMIIKATASLNADEAEWY
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcgcgaagtggacttcacagtattgggaccgtctctcttccttgccagtcttg
gtcctggttaactgttgtgtcttgctggctagcgcggataatgccagtcaggcatattac
acagccctcatcaatgtgactgtcttgaaccccgaccgagtcagccccacgttactaagg
atcgatcgtggacgctacgggcaggattcccccaaagtggaggtcaaaggcctgctgctg
gcaccagtgcctatcaacggagtggtggatcgtctgggctgtgatcctcgaacacgtttc
catgttcctccgaataccaagcagtggattgccttgctgcaacgaggaaactgtacattt
agagagaaaatattgcgagcagcttcacataatgccacagctgtggtcatttacaacaat
atatccagtgaggaacctgtcactatgactcatcaaggaactggagacattgttgctgtc
atgattacagagtccaaggtaaaggagatcctaaattacttggaaaagaacatctctgtc
ctgatggcaatagcagttggagcccgagttcctccaaagaattttagtcgtggctctcta
gtctttgtgtcaatatcattcatcgttttgatgataatttcatcagcatggttaatattt
tacttcatccagaagatcaggtacacaaatgcacgtgacaggaaccaggtaagatgcccc
ttgcttctctctgaaacagacccagactttgatcattgtgctgtctgtatcgagtgttac
aagcagaacgatgttgtccgcattctgccatgcaagcacgttttccacaaagcctgtgtg
gatccttggcttagcgaacactgtacctgtcctatgtgtaaactgaacattttgaaggct
ctgggaattgtaccaagtgtgccatgtacagataacgtagcctttgatatggaaaggctc
accagaggccagccagccaatagacgatcagcacttggtgactttgccaatgacaactca
ctcagcctggagcccctacgtacttctgggatgtcacagcttccacaggacggggaaata
actccaaggacaggggagatcaacattgctgtaacaaaagaatggtttattattgccagt
tttggcctcctcagtgccctcacactctgctacatgatcatcaaagctacagctagcttg
aatgctgacgaagcagaatggtattga
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