Trachemys scripta elegans (red-eared slider): 117881550
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Entry
117881550 CDS
T07347
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117881550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117881550
03041 Spliceosome [BR:
tst03041
]
117881550
03032 DNA replication proteins [BR:
tst03032
]
117881550
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
117881550
Spliceosome [BR:
tst03041
]
Complex A
U1 snRNP components
Sm proteins
117881550
U2 snRNP components
117881550
Complex B
U1 snRNP components
117881550
U4/U6.U5 tri-snRNP components
117881550
Complex C
U2 snRNP components
117881550
DNA replication proteins [BR:
tst03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
117881550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF7724
SM-ATX
Motif
Other DBs
NCBI-GeneID:
117881550
NCBI-ProteinID:
XP_034634833
LinkDB
All DBs
Position
8:30580915..30582137
Genome browser
AA seq
95 aa
AA seq
DB search
MKEEQDVIPACKSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEE
YIDGALSGHLGEVLIRCNNFLYTRGEEEEDGEMRE
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagagcaggatgttattccagcttgcaagagcttgcccctgaaccccaagccc
ttcctgaacgggctgacggggaagccggtgatggtgaagctgaagtgggggatggagtac
aagggctacctggtgtctgtcgatggctacatgaacatgcagcttgcaaacacagaagaa
tacatagatggtgcattgtcaggacaccttggtgaagttttgataagatgtaacaacttc
ctgtacactagaggagaagaagaagaagatggagaaatgagagaataa
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integrated database retrieval system
