Trachemys scripta elegans (red-eared slider): 117881572
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Entry
117881572 CDS
T07347
Symbol
NOTCH2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117881572 (NOTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Ank
NOD
Notch
EGF_2
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_Teneurin
EGF_MSP1_1
JAG1-like_EGF2
cEGF
Motif
Other DBs
NCBI-GeneID:
117881572
NCBI-ProteinID:
XP_034634874
LinkDB
All DBs
Position
8:43817338..43962023
Genome browser
AA seq
2397 aa
AA seq
DB search
MRGPGPALGALLLLLLSRGEPAAALQCLDVFKPCINEGKCISYRNGTGYCKCPEGFLGDY
CQYRNPCESHTCQNGGTCETTSVVGKATCKCALGFTGEDCRYSESHICFVSHPCLNGGTC
QLLLQDTYECVCPPGYTGKDCQWIDACVSQPCANGSTCITSGSGFSCTCPAGYTGPKCEI
DVNECATSGQCQNGGTCHNLPGSYQCQCKPGFRGHRCENTYVPCSPSPCMNGGTCHQTSD
FTYECNCLPGFEGSTCEQNIDDCPNHNCQNGGVCVDGVNTYNCHCLPQWTGQFCTEDVDE
CQLQPNACQNGGTCTNHNGGHSCVCVNGWSGEDCSKNIDDCFNTPCAVGSTCIDRVASFT
CICPEGKTGLLCHLDDACVSNPCLMGALCDTNPLNGHYICTCPQGYKGADCTDDVDECAM
GKFPSANRLNLALIFSPGIRCSQHLGHFLKPFCHSLLSFPGFKGMHCELEINECQSNPCV
NNGECLDKVNRFQCVCPPGFTGAVCQIDIDDCSSTPCLNGAKCIDYPNGYECQCATGFTG
TLCEENINNCDPDPCHHGECQDGIDSYTCVCSSGYMGAICSEQVDECQSNPCLNEGRCID
LVNGYQCNCLLGTSGVNCENNLDDCASNPCIHGVCLDGINRYDCVCKPGVTGPRCNIDID
ECISSPCHNGGTCVNEMNGFRCLCPEGFHQPSCHSQADECLSNPCVHGNCTNDVSGYMCL
CDPGWVGTDCEVEENACLSNPCQNGGICDSLVNGYRCICRKGFKGVNCQLVLSPCSPDPC
ENSGICQESPDSEGYTCQCAAGWEGQRCTVDIDECVSKPCKNHAVCHNTQGSYLCECRPG
FTGGDCESNIDDCLSNPCQNGASCVDGVNSFLCTCLPGFQGDKCQTDINECLSEPCKNGG
TCTDYVNSYTCKCQAGFEGTHCENNIDECTETSCFNGATCVDEINSFSCQCPVGFTGAFC
VMEINECDSHPCLNKGTCVDSLGTYQCICPLGYTGKDCQTLMDLCSKSPCKNKGTCVQRK
TQSQCICPPGWTGAYCDVPNVSCQVAASQRGVHVDQLCQHSGICFDVGNSHRCRCHMGYT
GSYCEEQLDECTSNPCQNGATCHDYLRGYQCECVPGYQGVNCEYEMDECQFQPCQNGGTC
IDLVNHFMCSCPPGTRGRLCEENIDDCASDLGGPRCFNGGQCIDQIGGYSCHCLPGFAGE
RCEGDINECLSNPCSPHGSLDCIQLVNDYTCICRSAFTGRHCETLTDVCPQQPCQNGGTC
VVASHLPFGFICQCPPGYSGFKCEFGSHSVCGQVKCKKGEQCIQTSSGPRCYCPKLSAGT
ACQTGTGCASAPCQNGGSCIPRTQPPYYYCQCPDQSEGSQCEHSVRPSQQPLGCPDQRCA
ERAKDGYCDKDCNMHSCQWDGGDCSLTGEDPWANCSSLLHCWKHFDGKCDEVCNTPECLF
DNFKCQQNSKQCKYDKYCADHYADGRCDQGCNSEECGWDGLDCAGDKAEKLAEGTLIIVV
LMPPDELLSDARSFLRTLGSLLHTNLRIKLDSQGNPMVFPYYGERPSSRSRRSLSGNHKP
RELEQEVIGTKVFLEIDNRQCSEDSDQCFKSTEAAAALLAAQAMQDMLPYPFVSVQSEPW
LPKKTQLVYLLAVAAVIILFILLLSVLVAKRKRKHGSLWLPEGFVLRRDPSNHKRREPVG
EDAVGLKNLSVQTTEGNLTDCSLSEHWTSSGGPPPKRAKAEDQALLSDGEEQVDQRQWTQ
QHLEAADICGTPSLALTPPQEDQEVDGLDVNVRGPDGCTPLMLASLRVGSSEISDEDEEM
EDSSANIITDLIYQGANLQAQTDRTGEMALHLAARYSRADAAKRLLDAGADANARDNMGR
SPLHAAVAADAQGVFQILIRNRVTDLDVRMNDGTTPLILAARLAVEGMVAELINCQADVN
AVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFEAAKILLD
HFANRDITDHMDRLPRDVAQDRMHHDIVHLLNEYNLTHSPSGHPGTMLSSALSPVICGPN
RSFLNLKHASLSKKPRKPSAKDAKRKGKKSVSESKGQFSESSVTLSPVDSLESPHAFVSE
PISSPVMPSPGVLPSSPHTQHTATSVQAAHTISFSNLHELQPLGCGSSTVLPSVSQLLSQ
HRITPPNCGLDRLRPVNISAEWMSRMEMNESQYNEMFGMVPQVVHSHPSMPQQSGMIQTD
VKHGGVSRVSLPPIMTFQLVPKGGINQQAMPQQAQANCAQNIAGPLSSMYQVPDLAQLPS
ASFPMAVIPQQDGQVAQTNLPAYHQFQSSVGKYPTPPSQHSYSSSATERTPSHTRHLPGE
HPYLTPSPESPDQWSSSSPHSASDWSDVATSPSLGSNQRGPAAHMSEQQRSNMQVYA
NT seq
7194 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggcctggcccggcactcggggcgctcctgctgctgctgttgagccgcggggag
ccggcggcggctttacagtgcctagatgtttttaagccttgtatcaatgagggaaaatgc
atctcctatcgcaatggcacaggatattgcaagtgtccagagggttttcttggagactac
tgtcagtacagaaacccttgtgaaagccatacctgtcagaatggaggaacatgtgaaact
acatctgtggtcggaaaagccacttgtaaatgtgctttaggattcacaggcgaggactgc
agatactctgaatcgcacatctgctttgtatctcacccctgtttaaatggagggacctgc
caactgcttctccaggacacatatgagtgtgtctgtccaccaggttacacaggaaaggac
tgccagtggattgatgcttgtgtgtctcagccatgtgccaatggaagtacgtgtatcaca
tctggaagtgggttctcctgcacctgcccagcaggctatactggcccaaagtgcgagatt
gatgtaaatgaatgtgccacatcaggacaatgccaaaacggtggaacttgtcacaatttg
cctggttcttaccaatgccagtgcaagccaggctttagaggacatcgctgtgagaacaca
tatgtgccatgttcaccatcgccatgtatgaatggagggacatgtcatcaaaccagtgac
tttacctatgagtgcaactgtctgccaggctttgaaggaagcacctgcgagcagaatatt
gatgactgcccaaatcataattgccagaacggtggggtgtgtgtggatggtgtgaacact
tacaactgccactgcctcccgcagtggacaggtcagttttgtactgaagatgtggatgaa
tgtcagctccagcccaacgcctgtcagaatggagggacctgcaccaaccacaatggaggc
cacagctgtgtctgtgtcaatggctggagcggggaggactgcagtaagaacattgacgac
tgtttcaatactccctgtgctgtcgggtctacttgcattgatcgtgtggcctcatttaca
tgtatttgtccagaaggaaagacaggtctcctgtgccacttggatgatgcatgtgttagc
aacccatgcctgatgggagctctatgtgataccaaccctctgaatggacactacatctgc
acctgtcctcaaggctataaaggagcagactgtactgatgacgtggatgagtgtgctatg
ggtaagttcccatctgctaataggttaaatctagctttgattttcagtcctggaataagg
tgtagccaacaccttgggcactttctaaagcctttctgccattccttgttatcctttcca
gggtttaaaggtatgcactgtgaactggagattaacgaatgccagagtaatccctgtgtt
aataatggagaatgtctggataaagtcaatcgcttccagtgtgtctgcccacctggtttc
actggagcagtgtgccagatcgacattgatgattgctccagcacaccttgtctaaatgga
gccaagtgcattgattatccaaatggctacgaatgccagtgtgccacaggttttactggc
actttgtgtgaagagaatatcaacaactgtgaccctgacccttgccaccatggtgaatgc
caggatggaattgattcgtacacctgtgtttgcagttctgggtacatgggtgccatatgc
agtgagcaggtagatgaatgccagagtaacccctgcctcaatgaaggacgctgcattgac
ttggtgaatggctatcagtgcaactgtctcctgggcacttcaggagtgaactgtgagaat
aacttggatgactgtgcaagtaacccttgcattcatggagtctgtctcgatggcattaat
cgctacgattgtgtctgcaagcctggagttacaggtccaaggtgtaatattgatattgat
gaatgcatctccagtccctgtcataatggtggaacatgtgtaaatgaaatgaatggattt
cggtgtctgtgtcctgaaggtttccatcaacccagctgtcactcgcaagctgatgaatgt
cttagtaacccttgtgtacatggaaactgcacaaatgatgtcagtggatacatgtgtctc
tgtgaccctggttgggttggaacagactgtgaagtggaagagaacgcatgtctgtcaaac
ccgtgccagaatgggggaatttgtgacagtctggtgaatggatacagatgtatctgcagg
aaaggattcaaaggagtgaactgccagctcgtgctgtctccctgctctcctgatccatgt
gagaactctggaatctgccaagaatctcctgactcggagggctacacctgccagtgtgct
gctggctgggaaggccagagatgtacagtggatatagatgagtgtgtgtcaaagccttgc
aagaatcatgctgtgtgccataacactcaaggcagttacttgtgtgaatgccgcccaggt
ttcactggaggagactgtgagagcaacattgatgactgcctttcaaatccctgccagaat
ggagcttcatgtgtggatggggtgaactctttcttatgcacttgtctgcctgggttccag
ggagataagtgtcagaccgatataaatgaatgtctgagtgaaccttgcaagaatggaggc
acctgcacggactatgtcaacagctacacctgcaagtgtcaggcagggtttgaggggacc
cactgtgagaacaacattgatgagtgtaccgagacttcttgtttcaatggagccacttgt
gtggatgagatcaactccttttcttgccagtgcccagtgggattcactggggccttctgc
gtgatggaaattaatgaatgcgattcccatccttgtttgaacaaagggacttgtgtggat
agcctggggacctaccagtgcatctgtcccttgggttacactgggaaagactgccaaaca
ctcatggatctgtgcagcaagtctccctgtaagaacaaaggcacgtgcgtccagaggaaa
acccagtctcaatgcatctgtccacctggttggactggcgcctattgtgacgtgcccaac
gtctcctgtcaggtggctgcttcacagaggggagtccacgtagaccaattgtgtcagcat
tctggcatttgctttgatgtgggaaacagtcatcgctgccgatgccacatgggctacact
ggcagctactgtgaagagcagttggacgaatgcacctccaatccatgccagaacggtgcc
acctgccatgactatctcaggggatatcagtgtgagtgtgtgccagggtaccaaggagtc
aactgtgaatacgaaatggatgagtgccagttccagccctgccagaatggaggaacctgc
attgatcttgtcaatcatttcatgtgctcctgtccaccaggaactcggggccgtctttgt
gaggagaacattgatgactgtgcttcagatctgggaggaccccgttgctttaatggagga
cagtgcattgaccaaattgggggctacagctgccactgtctcccaggctttgcaggcgag
cgctgtgagggggatattaatgagtgcctctccaacccttgtagccctcatggtagccta
gactgcattcagctggtcaatgattatacatgcatctgtcgcagtgccttcaccggtcgt
cactgtgagaccctaacagatgtgtgtccccagcagccttgtcagaatggcggtacttgt
gttgttgccagtcatttgccttttgggttcatctgccagtgtcctccaggttattctggg
tttaaatgcgagtttggcagccacagtgtctgtgggcaagtgaaatgcaagaaaggagag
cagtgcatccagacatcctctgggccccgatgttactgcccaaagctctcagctggcaca
gcgtgccagactggtacaggctgtgccagtgcaccatgccagaatggtggaagctgcatt
cccaggactcagccaccttactactattgccagtgtcctgatcagtctgaagggagccag
tgtgaacactcagtgcgccccagccaacagccactgggctgtccggaccaacgctgtgca
gaaagagcaaaagatggctactgtgacaaggactgtaacatgcacagctgccagtgggat
ggaggtgactgttccctgacaggggaggatccttgggccaactgctcttccttgctgcac
tgctggaagcacttcgatggcaagtgtgacgaggtctgtaacacgcccgagtgcctcttc
gacaacttcaagtgtcagcaaaatagcaagcaatgcaagtatgataagtactgtgcagat
cattatgcggacgggcgctgtgaccagggctgtaacagtgaggagtgtggctgggatggc
ctggactgtgctggtgacaaagctgagaaactggcagaagggacccttattattgtggta
ctgatgccccctgatgagctgctcagtgatgcccgcagtttcttgcggactttaggatcc
cttcttcataccaacctgagaataaaactggactcacagggaaaccccatggtgttccca
tactatggggagaggccgtcatcacggagtcggcgatcactctcaggcaatcacaagccc
agagaacttgaacaggaggtcattggcacgaaggtgttcctggaaattgacaaccgccaa
tgtagtgaagattcagaccagtgctttaaaagcacagaagctgctgcagctctcttagca
gctcaggccatgcaggacatgctgccctacccctttgtgtctgtccaaagtgaaccttgg
ctaccaaagaagacccagttggtttacctacttgctgtggcagctgtgatcatccttttc
atcctgttgttgagtgtgcttgtggcaaagagaaagcgcaagcatggctctctctggctt
ccagaaggctttgttctacgccgggaccccagtaaccacaagcgcagagagccagttggg
gaagatgcagttggattgaagaatctgtcagttcaaactacagagggtaatttgactgac
tgcagtctgagcgagcactggaccagcagtggaggacctccgcctaagagagcaaaggct
gaagaccaagctttgctgtcagacggagaggagcaggtagatcagcgccagtggacacag
caacatctagaggcagctgacatctgtgggaccccatctctagcccttacaccaccacag
gaggatcaggaagtggatgggctggatgtcaatgtcagagggccagatgggtgtacccca
ctcatgttggcatctctccgtgtgggcagctccgagattagtgatgaagatgaagaaatg
gaagattcttcagcaaatataataacagacttgatttatcaaggtgccaacctgcaggcc
caaacggaccgtactggggagatggcactgcacttagcagcccgctattcaagagcagat
gcggcaaaacgcttactagatgctggtgctgatgctaatgcacgagacaacatgggccgg
tctccccttcatgcagccgtggcagctgatgcacagggtgtcttccagatcctgatccgt
aacagagtgacggacctggatgtgcggatgaatgatggcacaaccccactaattctggct
gcccgattggctgtggaaggaatggtggccgagctgatcaactgccaggctgatgtcaat
gcagtagacgatcatggtaaatctgctcttcactgggctgctgctgttaacaatgtggag
gcaacattagtgctgctgaaaaacggagccaatagagacatgcaggacaacaaggaggag
acaccgctgttcctggcagcgcgggaagggagttttgaagcagctaaaatcctgttggac
cattttgccaatcgagacatcacagatcacatggatcgcctcccccgagatgtggcacag
gaccggatgcaccatgacattgtgcaccttctgaatgagtacaacttgacccatagccct
tctgggcaccctggcaccatgctgagctcagccctctcgccagtgatctgtggcccaaat
aggtccttcctcaatttgaaacatgcttccttaagcaagaagccaagaaaaccaagtgcc
aaggatgcaaagaggaaggggaagaaatctgtgagtgaaagcaaggggcagttttctgag
agctcagtaaccctctcaccagttgattccctggaatccccccatgcttttgtatctgaa
ccaatatcgtctccagtgatgccatcaccaggggttttaccttcatccccacacacacag
cacactgccacatcagtacaggctgcgcacaccatttccttctccaacctccatgagctg
cagcccctgggatgtggatccagcactgtgcttccttctgtcagccagctgctttcacag
cacagaatcacccctccaaactgtgggcttgatcgactcaggccagttaacatttctgct
gaatggatgagtcgtatggaaatgaatgaatcccagtataatgagatgtttggcatggtc
ccccaggtagtgcattctcaccccagcatgcctcagcagagtggcatgattcaaaccgat
gtgaagcacggcggagtctccagagtgtcactgccacctattatgactttccaactggtt
cccaaaggtggcataaaccagcaggcaatgcctcagcaggcacaggcaaactgtgctcag
aatatagctggtcctcttagttccatgtaccaggtaccagatctagctcagttgccaagt
gcctcctttcccatggcagtgatccctcagcaggatggacaagtagctcagacaaacctc
ccagcctatcaccagtttcagagctcagtgggaaagtaccccactccaccatcacagcac
agctactcctcctctgccacagagaggactcccagccataccaggcacttgccaggggaa
cacccatatctgactccatcacctgagtcacctgatcaatggtcaagctcgtctccgcac
tctgcctcagattggtctgatgtggccaccagccccagcctcggcagcaaccagcgaggg
cctgcagcacatatgtcagagcagcagcggagcaacatgcaggtttatgcctaa
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integrated database retrieval system
