Trachemys scripta elegans (red-eared slider): 117881604
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Entry
117881604 CDS
T07347
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117881604 (SH3TC2)
Membrane trafficking [BR:
tst04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117881604 (SH3TC2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_2
SNAP
SH3_1
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
117881604
NCBI-ProteinID:
XP_034634944
LinkDB
All DBs
Position
8:complement(21147962..21176303)
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AA seq
1343 aa
AA seq
DB search
MGCCFGAPLQRDLSLWCTGEEPDSCSPTPAILLPTWSSLQNYTAEPQEKCFPEETMASGN
PRQLGPGDQPAQVAESPLETESVSLAVGEGFPTAVFHFKEIALVFSVESRASQCVNSQLQ
EAARKKLWALENDDKDVCDLFKELSARLVCIRAQKDQFLLTFKTIEEIWKFSTYLALGYV
ACCLEHLLFDHGYWLNCSLVEDTEIRITVDEDHLATMYLGLLLQEGHFFSRAVLNVLHPM
EGGEESLKLHENELVHMKDIGKESKWEGMSLSTGQRGLVAVTAVEPLSHPFYQWFLKNNP
MNCGISKEISGSTSQPIGKGRCTATEDHRGRGWDELSFSKGDSIEVVGFLIPGLQWFVGK
STSSGTIGFVQSKHIAAETCEPLGKCSVFLSEEEKSSLLLLLGNGSEQHYAGLLEDLART
DITSVYRLAGFEPTATCPGGPSEAALQGCKDVQLFKTFGEAAANGLSTPSDSEQSSSEGE
APPTALEEFLLREPDDLDDPKFFIDLNAGHMEDSEVSDPILTFLNQGCYVAAFQSFYDLS
FSFLRSTFYGFSDEDKLVLYLETSRNCAKRTHQGWAHTRLCFLLGRMCIKRVKFSQARVY
FEEAMSVMDKGFDDLPLLAALYVNLAAIYLKQKMRHKFSSMLGKAVALLTCLPGHLFSSE
NELEVVKYVLREAIVVGNAPLEARACFLVVKLFLQLGKYDEVLPFVERLQFLSTCFSSQD
SSATCLDTTPILSYLYDKKYLPYITLASTRLFVPSGIKGAPTPIWRTGLVLQNISKLLGS
QLGRSSIPAIACLYLRHALNFSHESGAVSMQKTLCSVLSKMYLQHGMLDGALYYSARAVA
LGRLMSEEEAFESSLCLGWMYVLASQPAKSREIMLRLLHSLRETDSVTQDGAVHNLLAIA
LKEEGQVKKAAENYLWALNKAKETGNRRNQAIALANLGHLTLSCRATQLAESYFLQSVRL
YIELQGGEDAEIELVQVLLWLAQAMVSRHRIEDSKLCYELALVFALKSHNVKSQLHITES
LCHFYSKVSPNLGACITYHEHWVSLAQQLRDREIEGKVLQTLSRLYQTLDIPKSLRWSLD
CTKQSLRIFIDLGETAKAAQAWLQAGRLYYLLQEDELVEMYFQAAIQTALKPGELFLAMD
LYEEAGDIFFNGNRNRHQAVEYYRGGAVPLARKLKATRTELRLLNKLAELHIGLQGYEKA
LEFATLAARLSSSIGDPLQELVAFHRLATVYYFLQMYEMAEDCYLKTLALCSPVLQCAEE
AMYYSKVYCRLGNLTLHKLKDEHDAAAYFLLALAAATELGDQKLQGTIHAKLALLYNAPL
WHKGPDWCATYRTRWLSEGGHVV
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgggctgctgctttggtgcccctttgcaaagggatctttcattatggtgcacaggtgaa
gagccggattcctgttctcccaccccagccatacttctgcccacttggtcaagtctgcag
aactacacagctgagcctcaagaaaaatgtttcccggaggagaccatggcatcaggtaac
cccaggcagctgggtccaggcgatcagcctgcacaggtagcagagagccctctggagacc
gagtccgtgtcattggctgtaggggaaggatttccaactgccgtgtttcattttaaagag
attgccctcgtgttctctgttgagagtcgcgcttctcagtgtgtcaactcccagctgcag
gaggcagcaaggaagaagctgtgggccctggaaaatgatgacaaggatgtctgtgatctt
ttcaaggagctgtcagccaggctggtctgtatccgggcccagaaggatcaattcctcctc
accttcaagaccatagaagaaatctggaagttttccacatatttggctttaggctatgtg
gcttgctgtttggagcatcttctcttcgaccatggatactggctgaactgttctttggtg
gaggatactgagatcagaattactgtagatgaagatcacttggccaccatgtacctgggt
ctgctactccaggaaggtcacttcttttccagagcagtgctcaatgtgcttcatcccatg
gaggggggagaggaaagcttaaagctccacgagaacgagctagtccacatgaaggacatt
gggaaagaatcgaaatgggaagggatgtccttatcgacaggtcagcgaggtctggtggct
gtgacagccgtagagccactgtcccacccattttaccagtggtttctgaagaacaatcca
atgaactgcggcatctccaaggagatcagcgggtcaacctctcagccaattggcaagggg
cggtgcacggccacagaggatcacagagggagaggatgggatgaactgagtttctccaag
ggagacagcatagaggttgttggttttcttataccaggactgcagtggtttgtggggaaa
tccacaagcagtgggaccattggctttgtccagagcaaacacatagcggcagagacttgt
gaacctctgggaaagtgttcagtgtttctaagtgaagaagagaaatcctcccttctcctt
ctcctgggcaatggcagcgagcagcactacgccggccttctcgaggacctggcccgcaca
gacatcacctctgtgtacaggcttgctggtttcgaacccacagccacatgcccaggaggg
ccatctgaggctgctctccaggggtgtaaggatgtccagctgttcaagacctttggggaa
gctgctgcaaacggcctgtccacacctagtgactcagagcagtctagctcggagggcgaa
gcaccccctactgccctggaagaatttcttctgcgggagccagatgacctcgatgacccc
aagttctttattgacctgaacgctgggcacatggaggactctgaagtctctgaccccata
ctgaccttccttaaccaagggtgctatgtggccgctttccaaagcttctatgacctctcc
ttttccttcctccgctccactttttatggcttctccgatgaggacaaactggtcttgtac
cttgaaacctccagaaactgtgccaagaggactcaccaaggctgggctcataccaggctc
tgtttccttctgggcagaatgtgcatcaagagggtaaagttctcccaggcccgggtttat
tttgaagaagccatgagtgtcatggacaaggggtttgatgatctgcccctactggctgca
ctgtatgtgaaccttgccgccatctacctgaagcagaagatgaggcacaagttctcctcc
atgctggggaaagcggtggccctgctgacctgcttgcctggacacctcttcagctccgag
aacgagttggaggttgtgaagtacgtcctgagggaagccatcgtcgtgggcaatgccccc
ttggaggcccgggcctgctttcttgttgtcaagcttttcctgcagttgggcaaatatgac
gaggtcctgccctttgtggagcgccttcagttcctctctacctgcttctccagccaggac
tccagtgccacatgcttggacaccacccctatcctgagctacctctatgacaagaagtac
ttgccgtacatcacgttggcttctaccaggctgtttgttcccagtggcataaagggggca
ccgacacccatatggagaactggcttagtcctccaaaatatctccaagctcttgggaagc
cagttgggcaggagcagcatcccagcaattgcttgcctatatctcaggcatgcattgaac
ttctcccacgagagtggagctgtgtccatgcagaagaccttgtgttctgtcttgtccaaa
atgtacctccagcatggcatgttagatggagcactttattactcggccagagctgtagcc
cttggcagactgatgagtgaggaagaggccttcgaatcttccctctgcttggggtggatg
tatgttctggccagccagccagctaagtctagggagatcatgttgcggctcctgcattct
ctgcgcgagacagacagtgttactcaggatggggcagttcacaacctcctggccatcgcc
ctcaaagaagaaggacaggtgaagaaggcagcagagaattacctatgggccttaaacaaa
gctaaggagactggcaacaggcggaaccaggcgattgccctggccaaccttggacacctg
actctctcgtgcagggcgacccagctggcagagagctacttcctccagtctgttcgactg
tacattgaactccagggtggggaagatgcagagatagagctggtgcaggtcctgctgtgg
ctggcacaggccatggtgagcaggcacaggatagaagacagcaaactctgttatgagctg
gcactggtgtttgccctgaagtcacacaatgtgaagagtcagcttcatatcactgagtcc
ctctgccatttctacagcaaagtatccccaaatcttggggcctgcattacctaccatgag
cactgggtatccctggcacagcagcttcgggacagagagatagaagggaaagtcctgcag
accctcagccggctctaccagactctagacatacccaagtccctgagatggtctctggac
tgcaccaaacagagcttaaggatcttcattgacctgggggagacggccaaagcggctcag
gcctggctgcaggctgggaggctctattatctcctgcaagaggatgagctggtggaaatg
tacttccaggcagccatacagactgctctgaaaccaggagagttgttcttggccatggac
ctgtatgaagaggctggggatatctttttcaatggcaaccgaaacaggcaccaagcagtg
gaatattacaggggaggtgctgtgcctttggccaggaaactgaaggccaccaggacagag
ctgcggctgttgaataagctagcagagctgcacattggcctgcagggctacgagaaggcc
ctagaatttgccacgctggcagccaggctcagcagcagcataggagatccgttgcaagag
ctggttgcatttcaccgcctggctacggtgtactatttcctgcagatgtatgagatggca
gaggactgctatctgaagacacttgccctgtgctctccagtgctgcagtgtgcggaagag
gccatgtactattccaaggtttactgccgccttggcaacctgaccctgcacaaactgaag
gatgaacacgatgctgctgcctatttcctgttggccctggctgctgccactgaactagga
gaccagaagctccaaggcaccattcatgccaagctggctctcctatacaatgctcccctg
tggcacaagggcccggactggtgtgctacatatcggaccaggtggctgagcgaaggaggg
catgttgtctga
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