Trachemys scripta elegans (red-eared slider): 117881681
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Entry
117881681 CDS
T07347
Symbol
LRRC8C
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C
KO
K22038
volume-regulated anion channel
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117881681 (LRRC8C)
Ion channels [BR:
tst04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
117881681 (LRRC8C)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_5
LRR_R13L1-DRL21
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
117881681
NCBI-ProteinID:
XP_034635140
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Position
8:complement(77448212..77474642)
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AA seq
802 aa
AA seq
DB search
MIPVTEFRQFSEQQPAFRVLKPWWDVFTDYLSVAMLMIGVFGCTLQVMQDKIICLPKRIQ
PSQNHAHIPNVSNAVPNTTPLPPPKPSTTPATVEMKGLKTDLDLQQYSFINQMCYERALH
WYAKYFPYLVLIHTLIFMLCSNFWFKFPGSSSKIEHFISILGKCFDSPWTTRALSEVSGE
DSEEKDNRKNNISRSNTIQPSTEGTLVKTQSLKSIPEKFVVDKGTAGALDKKEGEQAKAL
FEKVKKFRLHVEESDLLYAMYVRQTVLKVIKFLIIIAYNSALVSEVQFTVDCNVDIQDMT
GYKNFSCNHTMAHLFSKLSFCYLCFVSIYGLTCLYTLYWLFYRSLKEYSFEYVRQETGID
DIPDVKNDFAFMLHMIDQYDPLYSKRFAVFLSEVSENKLKQLNLNNEWTADKLRQRLQTN
AYNRLELQLFMLSGLPDTVFEITELQSLKLEIINNVMIPATIAQLDNLQELSLYQCSVKI
HSAALAFLKENLKILSVKFDDIRELPHWMYGLRNLEELYLIGSLSHDISKNITLESFREL
KSLKILYIKSNVSKIPQSAVDVSSHLQKMCIHNDGTKLVMLNNLKKMVNLTELELVHCDL
ERIPHAVFSLLSLQELDLKENNLKSIEEIVSFQYLRKLTILKLWYNSITYIPEHIKKLTS
LERLSFSHNKIEVLPSHLFLCNKIRYLDLSYNDIRFIPPEIGVLQSLQYFSITCNKVESV
PDELYFCKKLKTLKIGKNNLSVLSPKIGNLVFLSYLDIKGNHFEILPPELGECRALKRTG
LVVEDTLFETLPSDVREQMKAE
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgttaccgaatttcgtcagttctctgaacagcagccggcattcagagtactg
aagccatggtgggatgtgtttacggactatctctcagtagccatgctgatgattggtgta
tttggatgtactttacaggttatgcaagacaagataatatgccttccaaaaagaatacag
ccttcacagaaccacgctcacattcctaatgtgtctaatgcagtcccaaatacaacccca
cttcctccacccaaaccatccactactcctgccactgttgaaatgaaaggactaaagact
gatttagaccttcagcagtatagctttataaaccaaatgtgctatgaacgtgccctgcat
tggtatgcaaagtacttcccttaccttgtccttatacatactctgatcttcatgctatgt
agtaacttctggttcaaattccctggatcaagctcaaaaattgaacacttcatttccata
ttggggaaatgttttgattctccctggacaacaagggcattatctgaagtgtctggggaa
gactcagaagagaaggacaacaggaagaacaacataagcaggtcaaatactatccaacct
agcacagaaggcactttggtcaagactcagtctttaaaatcgatacctgaaaagtttgtt
gtagataaggggacagcaggggcactggataaaaaagaaggagaacaggcaaaagcattg
tttgaaaaggtgaagaaattccgactgcatgttgaagaaagtgatctgctctatgctatg
tatgttcgtcagactgtacttaaagttattaaattccttatcattattgcttacaatagt
gcactagtttcagaagttcaatttacagtagactgtaatgttgacattcaggacatgaca
ggatataagaatttttcttgtaatcataccatggcacatctattctctaaactttccttc
tgctacctgtgctttgtaagcatctatggactaacatgcctttacactttatattggttg
ttctatcgttcactaaaggaatattcttttgaatatgttcggcaagagactggaattgat
gatatcccagatgttaagaatgactttgcttttatgcttcacatgatagatcaatatgac
cctctttattcaaagagatttgcagtgttcctgtctgaagtcagtgaaaacaagctgaaa
cagctgaacttaaacaatgaatggactgcggataaattgagacagaggctacaaacaaat
gcatataaccggctagaactgcagctcttcatgctttctggacttccagacactgttttt
gaaattacagagctgcagtctttaaaacttgaaataattaataatgttatgataccagca
accattgcacagttggataatctccaagagctctctttgtaccagtgttctgtgaagatc
cacagtgctgccttggcttttctgaaggaaaatctgaagatcttgagtgtcaagtttgat
gacatcagagagcttccacattggatgtatgggctcagaaatttagaagagctctactta
attggttctctcagtcatgatatttccaaaaacattactcttgagtcttttcgggaactt
aaaagccttaaaattctctacattaaaagcaatgtatccaaaatcccacaatctgcagtt
gatgtttcaagtcatcttcaaaaaatgtgtatccataacgatggcaccaaattagtgatg
ctcaataacctgaagaaaatggttaacttgacagagttggagctggttcactgtgatttg
gagcgcatacctcatgcagtttttagccttctcagtctccaggaattggatttaaaggaa
aacaacctcaaatcaatagaagaaatagttagttttcaatatctgagaaaacttacaatc
ctaaaactgtggtacaacagtataacatatatcccagagcatataaagaaactcactagc
ctagagcgtctttcctttagtcacaacaaaatagaggttcttccatcccacctattccta
tgcaacaaaatcagatacttagacttgtcttacaatgacatacgatttattccaccggaa
ataggagtgctgcaaagtttacagtatttttccatcacttgtaacaaagtggagagtgtg
ccagatgaattatacttttgcaaaaaacttaagactctcaagattgggaaaaataatttg
tcagtcctttcacctaaaattggtaatttagtattcctctcctatttggatattaaaggc
aatcactttgaaattctcccgcctgaacttggtgagtgtagggctttgaagcggactggc
ttggttgtagaagacactttgtttgaaactttgccttctgatgttagagagcagatgaaa
gctgaataa
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