Trachemys scripta elegans (red-eared slider): 117881719
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Entry
117881719 CDS
T07347
Symbol
MKRN1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117881719 (MKRN1)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117881719 (MKRN1)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117881719 (MKRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-CCCH_3
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
zf-CCCH_PARP12
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
117881719
NCBI-ProteinID:
XP_034635203
LinkDB
All DBs
Position
1:complement(101118092..101149402)
Genome browser
AA seq
468 aa
AA seq
DB search
MAEAAAPGTTAATPGAAATASSPTAAPPAPPAAAGSGGGGGWTKQVTCRYFMHGVCKEGN
NCRYSHDLSTSQSAMVCRYYQRGCCAYGDRCRYEHTKPLKREEVTTVNPAAKTYPSASSD
LPSLPEALEASTGETDVEDTDLAATGAGAEDWVNAVEFVPGQPYCGRAAPSCIETPLQGM
VIEEEYEKQQTNVEMKKQLCPYAAVGECRYGENCVYIHGDVCDMCGLQVLHPVDAAQRSQ
HIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCI
RKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIQKYKEAMSNKPCRYFD
EGRGSCPFGGNCFYKHAYPDGRREEPQRQKVGTSSRYRAQRRNRFWEFIEERESSDPFEN
DEDEVVTFELGEMLLMLLAAGGDDELTDSEDEWDLFHDELEDYYDLDL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctccgggaacaacagcggcaacaccgggagcagcggccacggcc
tccagccccacagccgcgccccccgcgccgccggctgcagcggggtcgggaggagggggc
ggctggaccaagcaggtcacctgcaggtatttcatgcatggggtttgcaaggaagggaac
aactgccgttactcccatgatctctccacaagtcagtctgctatggtgtgcaggtattat
cagcgaggatgctgtgcttacggagatcgttgccgatatgaacataccaagccattgaag
cgggaagaagtgactactgtgaatccagctgcaaaaacttatccatcagcatcttcggac
ctcccgtctctccctgaagcacttgaagcaagcactggtgagactgacgttgaagataca
gatctggcagctacaggagcaggtgctgaagactgggtgaatgctgtagaatttgtccct
gggcagccatattgtggacgtgcagccccttcctgcatcgaaacacccttgcagggaatg
gtaattgaggaagagtatgaaaagcagcaaacaaatgtggagatgaagaagcaactgtgc
ccctacgctgcagtaggagaatgtcgttatggagagaactgcgtgtatatccatggggat
gtgtgtgacatgtgtgggttgcaggtcctacatccagttgatgctgcccagagatcccaa
cacataaagtcttgcattgaggctcatgagaaggacatggagctctcatttgccgtccag
cgtagtaaagacatggtgtgtgggatctgcatggaggtggtatatgaaaaagccaacccc
agcgagcgccgctttgggatcctctccaactgcaaccatacttactgtctcaaatgcatc
cgcaagtggaggagcgctaaacaatttgagagcaagattataaagtcctgcccagaatgt
cggatcacatctaactttgtcattccaagtgagtactgggtggaggagaaggaagagaag
cagaaactcattcagaaatacaaggaggcaatgagcaacaagccatgcaggtattttgat
gaaggccgtgggagctgtccatttggagggaactgtttttacaaacatgcatatcccgat
ggtcgccgagaggagccacagagacagaaagtgggaacatcgagtagatatcgggcccag
cgaaggaatcggttctgggaattcattgaggagagggagagcagcgatcccttcgagaac
gacgaggatgaggttgtgacctttgagctcggcgagatgttgctcatgcttttggcagca
ggaggtgatgatgagttgacagactccgaggacgagtgggacttgtttcatgacgagctg
gaagattattatgacttggatctatag
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integrated database retrieval system
