Trachemys scripta elegans (red-eared slider): 117881731
Help
Entry
117881731 CDS
T07347
Name
(RefSeq) pseudouridine-metabolizing bifunctional protein C1861.05-like isoform X1
KO
K16330
pseudouridylate synthase / pseudouridine kinase [EC:
4.2.1.70
2.7.1.83
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00240
Pyrimidine metabolism
tst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
117881731
Enzymes [BR:
tst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.83 pseudouridine kinase
117881731
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
117881731
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
PfkB
DUF5518
Motif
Other DBs
NCBI-GeneID:
117881731
NCBI-ProteinID:
XP_034635246
LinkDB
All DBs
Position
1:101158612..101210693
Genome browser
AA seq
823 aa
AA seq
DB search
MIDRLSQHGACGWNAEQLKANSAASPTSPTSLQSCLSDNSVQTTVHVCQTETQSAIPAHS
MIGNLACTLGRQTAAVAPRIIQMRRFLHGTHFRVSSSVEEALADGRPIIALESTIITHGM
PYPQNLSMAREVEEIVRTNGSVPATVGILNGRIHIGLNDEELQFLAKSKNLVKVSRRDLP
YVLSQGLSGGTTVSGTMIVAHKAGIPVFVTGGIGGVHREGEKTMDVSADLTELGRTAVAV
VSAGVKSILDIGRTLEYLETQGVCVAAFGDSREFPAFFSRHSGFQAPCQVQNEEEAAKLI
ASTLALGLGSGVLIAVPCPKEEAASGQVIEAAIQEALSNARSKGITGKELTPFMLQKVNE
LTSGKSLDSNIALIQNNARVGSRIAVALSKIQTATGKRNLPRREKVTALRPVVIGGINVD
FIAKARNTTIQAGGQTNAGQVSQSFGGVGRNLADCLSRLGKTPLFISALGKDEHSESILR
YCRHMDMAGVLQLAGHSTATYCAVITGSGELSLGLGDMDIHQQITEQYVSKFKESLCLAP
LVCIDGNVPVATIQYVCEIAREHQIAVCYEPTDENKASKPFLSDSWKALTYISPNLRELR
AINRTLGHPVLADLPSRLEDVVRTAMTLTHPLLTQLHCVVVTLGMHGVLLCGRRVEGSVS
LCPGTRKQNAAGELCATHYPAIPISREEIVNVSGAGDSLMAGIIAGLLAGHDTDTCVRMG
LLAACLSLRSYEPISQEISTVSVNLEQVKARSWPEYSCPGIQSKTCQKPSDCDGCLGLYT
CKLPRGKCGLKAVSRKTGTAQLSCQPAQFSNECVRGPLQMARR
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgatagacagactatctcagcatggagcatgtggctggaatgcggagcagcttaaagcc
aattctgcagcaagccccactagtcccacctccctgcagagctgcttgagtgacaattca
gtgcagacaacagtccatgtatgtcagacagaaacccagagtgccatccctgcacacagc
atgattggaaatctggcctgtaccttgggaagacaaacagctgctgtggctcctaggatc
atccagatgagaagattcctgcatggaactcatttcagggtttcatcttctgtggaggaa
gctctggctgatgggagaccgatcatagccttggagagcaccatcattacacatggcatg
ccttatccccagaatttgagcatggccagagaggtggaagagattgtaaggacaaatggg
tcagtacctgcaaccgtgggcattttaaatggcaggatccacatcggcctcaatgatgag
gaacttcagtttctggcaaagagcaaaaatttagttaaggtatctcggagggatcttccc
tacgttctcagccagggtttgtctggcggtaccactgtgtcagggacgatgattgtggca
cacaaagcaggaattcccgtgtttgtgacaggagggatcggaggggtccatcgtgaagga
gagaagactatggatgtgagtgctgacctgactgagctaggacgcactgcagttgctgtg
gtttccgcaggcgttaagtctattctggacattggtaggacgctggaatatctggagact
cagggtgtctgcgtggctgcctttggagactcaagggaattccctgccttcttctcccgc
cacagtggcttccaagcaccgtgtcaggtacagaatgaggaggaggctgccaaacttatt
gccagcaccttggcactgggcctgggcagtggagtgctgattgcagtgccctgccctaag
gaggaagctgcttcaggacaggtcattgaagctgccatccaagaagctctgagcaacgcc
cggtcgaaagggatcacaggaaaagagctgactccctttatgctacagaaggtgaatgaa
ctgactagtggaaaatcgttggactccaatattgctctgatccagaacaatgccagagtg
ggcagccgcatagctgtggccctgagcaagatccaaactgccacagggaagcgcaacctg
cctcggcgtgagaaagtaactgcacttaggcctgtggtgattggaggcatcaatgtggac
ttcatagccaaggcgagaaataccaccatacaggctggcggacagacaaacgctgggcaa
gtgagccaatctttcggaggtgtggggagaaacctggcagattgtttaagccgtcttggg
aagacccctctctttatctcagctctggggaaggatgaacattcagagtccatcttgcgt
tactgccgccacatggacatggcaggagtccttcagcttgcggggcacagtacagctacc
tactgtgcagtgattacaggcagcggggagctcagccttggcttgggagacatggacatc
caccagcagataacagagcaatacgtgtccaagttcaaggagagtctgtgcttggcccca
ctggtatgtattgatgggaacgtgccagttgccaccattcagtacgtctgtgaaattgct
agagagcaccagatagcagtgtgctatgagccaacagatgagaacaaggcttctaagcca
ttcctttcagacagctggaaagcgctgacctacatctcccccaatctgcgagaactaagg
gcaataaatcggaccctggggcaccctgtgctggcagatctgccatccaggctggaggat
gttgtcaggactgcgatgaccctaacccaccccttgctgacacaactgcattgtgtggtg
gtgacactcggcatgcatggagtcctcttgtgtggcaggagagtggaagggagtgtctcg
ctgtgccctggaactcgcaaacagaatgctgcaggcgagctgtgtgccacccactaccca
gcaatccccatctccagggaagagatagtgaatgtctcaggagcaggtgacagtttaatg
gcagggataatcgctgggctacttgctgggcatgacacagatacctgcgtccggatgggc
ctgctcgctgcctgcctctccctccgttcatacgagcccatctcccaggagatcagtact
gtcagcgtgaacctggagcaggtcaaggctaggagctggccagagtattcctgtcctggg
attcagtctaagacttgccagaaaccctcagattgtgatggctgccttggcctctacacc
tgcaaactgcctagggggaagtgtggtttgaaagctgtttccaggaagacaggtactgca
caactctcatgtcagccagcccaattcagcaatgaatgcgtcaggggtccattacagatg
gccagacggtag
DBGET
integrated database retrieval system
