Trachemys scripta elegans (red-eared slider): 117881732
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Entry
117881732 CDS
T07347
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117881732 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117881732 (GTF2B)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
117881732 (GTF2B)
Prokaryotic type
Archaeal type
TFB
117881732 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
117881732
NCBI-ProteinID:
XP_034635247
LinkDB
All DBs
Position
8:77626092..77650967
Genome browser
AA seq
316 aa
AA seq
DB search
MASTSRLDVLPRVTCPNHPDSILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDTQNPLLSDGDLTTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFRE
ITNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PVDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaccagccgtttggatgtgcttcccagagtgacatgtccaaaccatccagat
tccattttagtggaagattatagagctggagacatgatctgtcctgaatgtggactagta
gtgggtgaccgggtcatagatgtagggtcagagtggagaactttcagcaatgataaagca
acaaaagacccatctcgagttggagacacccagaatcctctcttgagtgatggggattta
actacaatgattggcaagggcacaggtgcagcaagttttgatgaatttggaaattcaaag
taccagaatcgcaggactatgagcagctctgatcgagcaatgatgaatgcttttagagaa
attactaacatggcagacagaatcaaccttcccagaaatatagttgatcgaacaaataat
ttattcaagcaagtgtatgagcagaagagcctgaaggggagaagtaatgatgccattgct
tctgcttgtctctatatagcctgtagacaagaaggtgttcctagaacatttaaagaaata
tgtgcagtgtccaggatttcaaaaaaagaaataggtcggtgttttaagcttattttgaag
gctctggaaaccagtgtggatttgatcacaactggtgatttcatgtcaagattttgttca
aatctgggtcttcctaaacaagtacagatggcagcgacacacatagcacgtaaagctgtg
gaattagacttggttcctgggaggagtccgatctctgtagcagctgcagctatttatatg
gcgtcacaagcctcagcagagaaaaggacccagaaagaaataggagatattgctggtgtt
gctgatgttacaatccgacaatcttatagacttatctatccacgagctccagatctcttc
ccagtagacttcaaatttgacacccctgtggacaaactaccgcagctgtaa
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integrated database retrieval system
