Trachemys scripta elegans (red-eared slider): 117881898
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Entry
117881898 CDS
T07347
Symbol
BNIP1
Name
(RefSeq) vesicle transport protein SEC20
KO
K08497
protein transport protein SEC20
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117881898 (BNIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117881898 (BNIP1)
Membrane trafficking [BR:
tst04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
117881898 (BNIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
DUF2777
Sec16
7tm_6
FUT8_N_cat
YabA
Motif
Other DBs
NCBI-GeneID:
117881898
NCBI-ProteinID:
XP_034635595
LinkDB
All DBs
Position
8:complement(19889789..19897417)
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AA seq
228 aa
AA seq
DB search
MAAAGDVPVRVCNQEIVKFDLEIKAAVQDISDCQGPLSVLTELNARVKEKFQHLRLRIQE
LEQMAKERDKESEKQALLQEVENHKKQMLSNQTAWRKANLACKIAIDNSEKDELLPGGDL
LRQRKTTKESLAENASTITENLMGISRMMSQQVKQSEETMQTLANSSRTILDANDEFKSM
SGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYILKKRLFPFL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccggggacgtgcccgtgcgggtctgtaaccaggagattgtcaaattcgac
ttggagattaaagcggcggtgcaggatatcagtgattgtcaagggcctttaagtgtgctt
acagaattaaatgccagagtaaaggaaaagtttcaacatttacgtctcagaatacaggag
cttgagcagatggctaaggaacgagataaagaatcagagaaacaagccttactccaagaa
gtagagaaccataaaaaacaaatgctcagcaatcagacagcttggagaaaggcaaatcta
gcttgtaaaattgctatagacaactccgagaaagatgaactgctaccaggaggagacctg
ttaagacaaagaaaaaccacaaaggaaagcctggcagagaatgcaagtacaattacagag
aacctgatgggcattagcaggatgatgtctcagcaggtcaagcagagtgaggagaccatg
caaacactagccaattcttcacgaaccatcctggatgcgaatgatgaatttaagtccatg
tcggggacaatacagttggggcgaaagctcattacaaagtacaaccgcagagaactgacc
gataagctgctcatttttcttgccctggccttatttttggccactgtgctctacatcctg
aaaaagagactctttccatttttgtaa
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