KEGG   Trachemys scripta elegans (red-eared slider): 117881903
Entry
117881903         CDS       T07347                                 
Symbol
LARP1
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 1
  KO
K18757  la-related protein 1
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tst03019]
    117881903 (LARP1)
Messenger RNA biogenesis [BR:tst03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117881903 (LARP1)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 117881903
NCBI-ProteinID: XP_034635610
LinkDB
Position
8:complement(4112594..4183449)
AA seq 1088 aa
MATQVEALLPGNPLLPAEEHGLLIKKPQEGAREKGEPLMPHGEKATAEEGRGGAPDSCPK
GGGGGVAGEPPRRSAAPKPPSIKQQKEESNNQEKENLLQQRAGGENRLLGEAGGSSGGEE
GGEQGGGGRKEFIEAPPPKVNPWTKNAPVAVVTVNGQSPPEHTTPAKVVRAANPRQRKGS
KVGDFGDATNWPTPGEIAHKSIQQPPKPQPLRKLPIKKDMKEQEKGDGSDGKENLKTKSD
ESGEEKNGDDDNQKLAQKKKGNKHKWVPLQIDMKAEAPRDKTASRNNRQNEQHRHLSNNR
SDLKGWHPDNKHERNWPDHDETSSVKSEGGAVRGAFRGRGRGRGRGRSRGRGGTRSHFDY
QYGYRKFDSSDGSRTQKYASNITYYFDNVSSTELYSVDQELLKDYIKRQIEYYFSVDNLE
RDFFLRRKMDTEGFLPITLIASFHRVQALTTDVGLIVKALKDSKVVEIVDQKIRRKEQPE
KWPLPGPPMADYTQTDFSQLINCPEFVPRQSFQKETESAPGSPRSASPVATKTEEVSNLK
TMPKGLSASLPDLDSETWIEVKKRPRPSPARPKKVEESKAPQKQKDQDEPEELDFLFDEE
MEQIDGRKNTFTDWSDEDSDYEIDDRDVNKILIVTQTPPYLRRHPGGDRTGNHTSRAKMS
SELAKVINDGLYYYEQDLWTEQFEPEYSQIKQEVENFKKVNMISREQFDTLTPEPPVDPN
QEVPPGPPRFQQVPTDALANKLFGVPEPSTIARSLPTTVPESPNYRNARTPRTPRTPQLK
DPTQTPRFYPVVKESRTIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASISSSP
SEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEM
NTLFRFWSFFLRDHFNKKMYEEFKQLALEDGKEGYRYGLECLFRYYSYGLEKKFRPDIFK
DFQEETIKDYEAGQLYGLEKFWAYLKYSKAKNLDIDRKLQEYLSKFRRLEDFRVDPPMGE
EGGHKRFPSMSGGDGRKRYPSQSSSKPVSQSPSSQAHASSSQPAREDAKNLSHHALATAA
VASQTLGK
NT seq 3267 nt   +upstreamnt  +downstreamnt
atggcgacccaggtggaggctctcctgcccggcaaccccctactgcccgccgaggagcac
gggctgctcatcaagaagccccaggaaggggcccgggagaagggcgagcccctcatgccc
cacggggagaaggccaccgccgaggagggccgcgggggcgccccggacagctgccccaag
gggggcggcggcggcgtggcgggggagccgccccggcggagcgcggcgcccaagcccccc
agcatcaagcagcagaaggaggagagcaacaaccaggagaaggagaacctgctgcagcag
cgcgccgggggcgagaaccggctgctgggcgaggcggggggcagcagcggcggcgaggaa
ggcggcgagcagggaggaggcgggcgcaaggaattcatcgaggcccccccgcccaaggtg
aacccttggactaaaaacgccccggtggccgtggtcaccgtcaacggacagtccccccca
gaacatacaactccagccaaagtggtgagggctgcaaaccccaggcagcggaaaggaagc
aaggtcggtgactttggtgatgccacgaactggccgacccctggagaaatagcccacaag
agcatccagcagccgcccaaaccccagcccctccggaagctgcccatcaagaaagacatg
aaagaacaggagaaaggggacgggagcgatggcaaagagaacctgaaaaccaaatcggac
gagtccggggaggagaagaacggggacgacgacaaccagaagttggcccagaagaagaaa
ggcaacaagcacaagtgggtccctctgcaaatagacatgaaggcggaggcgcccagggac
aaaacggcctctcggaacaaccggcagaacgagcagcaccggcacctctccaacaaccgc
agtgatttgaaaggctggcacccggataacaagcatgagcggaactggcctgatcacgac
gaaacctccagcgtcaagagcgagggaggagcggtgcgaggagccttccggggcaggggc
cgcggccgaggccggggccggagtcgaggaagaggaggcactcgctcgcactttgactac
cagtatggctaccggaaattcgacagctcggacggctcgcgcacccagaagtacgccagt
aacatcacctactacttcgataacgtcagcagcacggagctgtacagcgtggatcaggag
ctgctcaaggactacatcaagcggcagatagagtactacttcagcgtggacaacctggag
cgggacttcttcctgcggcgcaagatggacacggaaggcttcctccccatcaccttgatc
gccagcttccaccgggtgcaggccctgaccacggacgtcggcctcatcgtcaaggctctg
aaggacagcaaggtggtggagatcgtggaccagaagatcaggagaaaggagcagccagaa
aaatggcctctccctggcccccccatggcggactacacgcagacggacttctctcagctc
atcaactgccccgagttcgttccccggcagagcttccagaaggaaacagaatctgcgccc
ggctctccccgctctgccagccctgtggcgactaagacggaggaggtcagcaacctgaag
actatgcccaaaggcctgtctgccagcttaccggacttggattcagagacgtggattgaa
gtgaagaagaggcctcggccttccccagccagacccaagaaagtggaggagtcgaaggcg
ccgcagaaacagaaggaccaagacgagcctgaggagctggacttcctgtttgacgaggaa
atggagcagatagacggccgtaagaacactttcaccgactggtcggacgaggactcggac
tacgagatcgacgacagggacgtgaacaagatcctgattgtgacgcagacgcctccttac
ctgcgccggcaccccgggggggatcgcacaggcaatcacacctccagggcgaaaatgagc
tctgagctagccaaggtcatcaatgacgggctgtattactatgagcaggacctgtggacg
gagcagtttgagcctgaatactcgcagatcaagcaagaagttgagaacttcaagaaggtg
aatatgatcagccgggagcagtttgatactctgaccccggagccccctgtcgatccaaac
caggaagtcccccctgggcccccccgattccagcaagttcctaccgacgctttggccaat
aagctattcggagtcccggagccttcaaccatcgcccgatctctgccaaccactgtgcca
gaatcgcccaactatcgcaacgccaggaccccccggacccctcgcacgcctcagctgaaa
gacccaacgcagacgccccggttctacccagtggtgaaggagagcaggacgatagatgcc
aagaccccccggaagaggaagacgcggcacagttcgaacccccccatggaatgccatgtg
ggctgggtgatggattcccgggagcacaggcctcgcactgcctccatcagctccagcccc
tcggaaggaacccctgccgtcgggagctacggctgcacccctcagtcgctgcccaagttc
cagcatccttcccacgagctgctcaaggagaacggcttcacgcaacatgtgtatcacaag
taccgtcggcgctgccttaatgagcggaaacgactgggcattggtcagtcccaggagatg
aacacgctcttccggttctggtcgtttttcctccgagatcactttaacaagaaaatgtac
gaggaattcaagcagctggcactggaagatgggaaggagggatacaggtatggcctggag
tgccttttcagatactacagctacgggctggagaagaaattccgaccggacatatttaag
gatttccaagaagaaaccatcaaggattatgaagctgggcagctctatgggctggaaaag
ttttgggcctacttaaaatattccaaagccaaaaatctggacatcgatcgcaagctgcaa
gaatacctcagcaagttcaggcgcctcgaggacttccgagtggacccacccatgggagag
gaaggtggtcacaagcgattcccgtccatgtcaggaggagatggaaggaagcgctacccc
tcccagtcttccagcaaaccggtcagccagtccccatccagccaagcccatgcctcgtcc
agccagcctgcgagagaggatgccaaaaacctgagccaccatgcccttgccacagcggct
gtggcatctcaaacactggggaagtag

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