Trachemys scripta elegans (red-eared slider): 117881929
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Entry
117881929 CDS
T07347
Symbol
GABRB2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04080
Neuroactive ligand-receptor interaction
tst04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117881929 (GABRB2)
04082 Neuroactive ligand signaling
117881929 (GABRB2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117881929 (GABRB2)
Ion channels [BR:
tst04040
]
Ligand-gated channels
GABA-A
117881929 (GABRB2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117881929
NCBI-ProteinID:
XP_034635683
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All DBs
Position
8:complement(23516701..23762423)
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AA seq
528 aa
AA seq
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MLRVRKRGYFGIWSFFLIIAMVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPV
AVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDT
YFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIES
YGYTTDDIEFYWRGGDNAVTGVTKIELPQFSIVDFRLVTKNVVFSTGAYPRLSLSFKLKR
NIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDMYLMGCFVFVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKLRMDVNKV
FYKDIKQNGTEFRSLDPTGNLSPTRRTTNYDYSLYTDRRIIGTYHCPEMYSTKMDPHENI
LLSTLEIKNEMAASEAVMGLGDPRSTMLAYDTSSIQYRKAGLPRHSFGRNALERHVAQKK
SRLRRRASQLKINIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgttgagagtccggaaaaggggctactttgggatttggtcattcttcttaataatagca
atggtgtgtgcacagagtgtcaatgaccctagcaatatgtcgctggtaaaagagaccgtg
gatagactcctgaaaggctatgacattcgcctgaggccagattttggaggtcccccagtg
gctgttggcatgaacatagacattgccagcatagacatggtatcagaagtcaatatggac
tatactttgacaatgtactttcagcaagcgtggagggataagaggctgtcgtataatgta
atacctttaaatcttacactggacaatagagtagctgatcagctttgggttcctgatacc
tacttcttgaatgacaagaaatcatttgtacatggggtcactgtgaagaacagaatgatt
cgtttgcatccagatggaacagtcctctatggtctcagaattacaacaacagctgcttgt
atgatggatctacgaaggtacccgctggatgaacaaaactgcacactggagattgagagc
tatggctatacaacagatgacattgaattttactggcgtgggggagataatgcagtcaca
ggagtgacaaagattgaactgccacagttctccattgtagacttcaggcttgtcaccaag
aatgttgttttctctacaggtgcctacccaaggctgtctctcagctttaaacttaagaga
aacattggctacttcattctgcagacctacatgccttccattctgatcactatcctctcc
tgggtttcattctggattaattatgatgcttcagctgcaagagttgctttaggcatcaca
actgtgctcactatgacaaccatcaatacacatcttcgagagactcttcccaaaattccc
tatgtgaaagccattgacatgtatctgatgggatgctttgtcttcgtttttatggccctg
ctggaatatgcattggtcaactacatcttctttggcaggggaccccaacgtcaaaagaaa
gcggcagaaaaagctgccagtgccaacaatgagaagttgcgaatggatgtcaataaggtc
ttttataaagatattaaacaaaatgggaccgaattccgatccctggaccccactggaaat
ctctccccaactagacggactaccaattacgattactctctgtatacggacagaagaata
attggcacatatcattgtccagaaatgtattcaacaaagatggatccacatgaaaacatt
ttgttgagcacacttgaaattaaaaatgagatggccgcctccgaggctgttatggggctt
ggggaccctagaagcactatgctggcctacgatacttcaagcatccagtaccggaaagct
ggcttgcccagacacagctttggtcgcaatgccctggagcgacatgtggcacaaaagaaa
agtaggctacggagacgtgcctctcaactgaaaattaacatccctgacttgactgatgta
aatgccatagatcgatggtcacgcatattcttccctgttgttttttccttcttcaatatt
gtctattggctttactatgtgaactaa
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