Trachemys scripta elegans (red-eared slider): 117881984
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Entry
117881984 CDS
T07347
Symbol
GABRA1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04080
Neuroactive ligand-receptor interaction
tst04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117881984 (GABRA1)
04082 Neuroactive ligand signaling
117881984 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117881984 (GABRA1)
Ion channels [BR:
tst04040
]
Ligand-gated channels
GABA-A
117881984 (GABRA1)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117881984
NCBI-ProteinID:
XP_034635783
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Position
8:23966503..24021220
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AA seq
455 aa
AA seq
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MKSILALCDCLWAWTLLLNTLTGRSYGQTSLQDEIKDNTTVFTRILDRLLDGYDNRLRPG
LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWRDERLKFKGPMTVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKLKDP
LIKKNNTYTAAATSYTPNIARDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKIDR
LSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcattctagcactttgtgactgtctttgggcctggaccctgcttttgaataca
ctgactggaagaagctatggacaaacttcattacaagatgaaattaaagacaatactaca
gtgtttaccagaatactggatcgtctgctggatggttatgataaccgcctgagaccagga
ttgggagagcgtgtaactgaagtgaagactgacatcttcgtcaccagctttgggcctgtt
tccgaccacgatatggaatatacaatagatgtatttttccgtcaaagttggagagatgag
agactaaaattcaaaggacccatgacagtcctccggctaaataatttaatggccagcaag
atttggacacctgatacttttttccacaatggaaagaaatcagtggctcacaacatgacg
atgcctaacaaactactacgaattacagaggatgggacactgctgtatacaatgagactg
actgtgagagcagaatgtccaatgcatttagaagactttccaatggatgcacatgcttgc
ccattgaaatttggaagctatgcctataccagagcggaggttgtgtatgaatggacaagg
gaaccagcaaggtctgtggttgtggctgaagatggctctcgactgaaccaatatgatctt
ctggggcaaactgtggactctggaattgttcagtccagtacaggggagtacgttgttatg
actacccacttccatttgaagagaaagattggttactttgtcattcagacatatctacca
tgcatcatgacagtgattctgtcccaggtgtctttctggcttaacagagaatctgttcca
gcaaggactgtatttggagtgacaactgttctcacaatgaccaccttgagcatcagtgca
agaaattcccttccaaaggtggcctatgccacagctatggattggtttatagcagtgtgc
tatgcatttgtgttttcagcactcatcgaatttgcaacagtgaactacttcacaaagaga
ggttacgcatgggatggcaaaagtgttgttcctgaaaagccaaagaaactgaaggatcct
ctcattaagaaaaataacacatacacagcagcagcaacaagctacacccctaatattgcc
agagaccctgggctggctaccattgctaaaagtgcaacaatagagcccaaagaagttaaa
ccagaaacaaaaccaccagaacccaagaaaacttttaacagtgtcagcaaaattgatcga
ctatcaagaatagctttcccactgctttttggaatctttaatttagtctactgggcaact
tatttaaacagagagccccagctgaaagccccaactccacatcaataa
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