Trachemys scripta elegans (red-eared slider): 117882040
Help
Entry
117882040 CDS
T07347
Symbol
COLGALT2
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00310
Lysine degradation
tst00514
Other types of O-glycan biosynthesis
tst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117882040 (COLGALT2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117882040 (COLGALT2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tst01003
]
117882040 (COLGALT2)
Enzymes [BR:
tst01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117882040 (COLGALT2)
Glycosyltransferases [BR:
tst01003
]
O-Glycan biosynthesis
O-linked Gal type
117882040 (COLGALT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
117882040
NCBI-ProteinID:
XP_034635894
LinkDB
All DBs
Position
8:complement(55250264..55347318)
Genome browser
AA seq
615 aa
AA seq
DB search
MAALPALRLLLCCLLWARSGASFPAEPPEGSAPLPESPLQKPTVFIAILARNAAHALPHC
LGCLERLRYPKSRLAIWAATDHNIDNTTEILREWLKNVQKLYHYVEWRPMEEPQSYPDEI
GPKHWPSSRFTHVMKLRQAALRTAREKWSDYIMFVDADNLLTNPETLNLMIAENKTVVAP
MLESRSLYSNFWCGITPQGYYRKAPDYALIREWKRLGCFAVPMVHSTFLVDLRKEASDKL
MFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYICNRERYGFLPVPLKLHQTLQEDVENFIH
VTIEAMIDHPPFEPSQYISIPPKYPDKMGFDEIFMINLKRRKDRRDRMLRTLYEQEIAVK
IVEAVDGKALNTSQLKALNIDMLPGYQDPYSSRPLTRGEIGCFLSHYSIWKEVVNRELEK
TLVIEDDVRFEHQFKRKLMKLMDDIEQVQLDWELIYIGRKRMQVQRPEKAVPNVMNLVEA
DYSYWTLGYAISFEGAQKLIGAEPFSKMLPVDEFLPIMYNKHPVEKYKEYYESRDLKAFS
AEPLLIYPTHYTGQPGYLSDTETSTIWDNETMSTDWDRAHSWKSRQQGQIHSDAQNKDAL
APQPSLDASSSRDEL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgctgcccgctctccggctgctgctgtgctgcttgctgtgggcgaggagcggg
gccagctttcccgcggagccgccggagggctcggcccctttgccggagtcccctttgcag
aagcccaccgtcttcatcgccatcctcgccaggaacgctgcccacgcgctgccccactgc
ctcggctgcctcgagcggctgcgctaccccaagagccggctggccatctgggcagccact
gaccataacattgataacaccacagagatcctcagagagtggctgaagaatgtgcaaaaa
ctgtatcattatgtggagtggaggcctatggaggagcctcagtcttaccccgatgaaatt
gggccaaaacactggccgagctccaggtttacccatgtgatgaaactcaggcaggcagct
ctgcgaactgcaagagaaaagtggtcagactacatcatgtttgtagacgcagataacttg
ctcaccaacccagagaccctgaacctgatgatagcagagaacaagaccgtggtggcacca
atgctggagtctcgctctctctattctaatttctggtgtggtatcacccctcagggctat
tacagaaaggcaccggattatgccctgatcagggaatggaagaggttgggctgttttgct
gtcccgatggttcactccacattcctcgttgacctgaggaaagaggcttcggacaagctg
atgttttaccccccacaccaggactacacctggacctttgatgacatcattgtctttgcc
ttctcaagccgccaggcaggcattcaaatgtacatctgcaacagagaacgctatggcttc
ctcccggtgccactgaaattgcaccagacactacaggaagacgtggagaacttcattcac
gtgacaatcgaggcaatgattgatcatcctccatttgagccctcgcaatacatctccatt
cccccaaaatacccagacaagatgggatttgatgagattttcatgatcaacctgaagcgt
cgaaaagacaggcgggatcgaatgctgcggacactctatgagcaggagattgcagtcaag
atagtagaagctgtggatggcaaggcattgaatacaagtcagctaaaagctctgaatatt
gatatgctacctggttaccaggatccttactcttccaggccactaaccaggggggaaatt
ggctgctttcttagccactattctatctggaaagaggtggtgaacagagagctggagaag
actctcgttatcgaagacgacgtgcgctttgagcatcagtttaagaggaagctcatgaaa
ttgatggacgatatagagcaagtccagctagactgggagctcatctacattggtcggaaa
aggatgcaggtgcagcgccctgagaaggcagttcctaacgtaatgaaccttgtggaagca
gattactcttattggaccctggggtatgcaatctcctttgaaggggctcagaaactaatt
ggggccgaaccttttagcaagatgctgcctgtggatgaattcctgccgatcatgtacaac
aagcatcctgtagagaagtacaaggagtactatgagtccagagacttgaaagccttctca
gcagagcccttgcttatttatccgacccattacacagggcagccgggttatctcagtgac
acagagacatccacaatctgggacaatgagaccatgtcgactgactgggacagagcccat
tcctggaagtcccggcaacagggccagatccacagcgatgcccagaacaaagatgccttg
gccccccagccatctctcgatgcatcgtcgtcgagggacgagctatga
DBGET
integrated database retrieval system
