Trachemys scripta elegans (red-eared slider): 117882070
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Entry
117882070 CDS
T07347
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117882070
Enzymes [BR:
tst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117882070
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Meiosis-specific proteins
Others
117882070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
117882070
NCBI-ProteinID:
XP_034635931
LinkDB
All DBs
Position
8:76442431..76520946
Genome browser
AA seq
1182 aa
AA seq
DB search
MFELAITRLLMEVPMPWLNIKIVYMAPIKALCSQRFDDWKDKFGPIGLSCKELTGDTVMD
DLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHVVKDESRGATLEVVVSR
MKTIQSSLSRISENPDMLTPMRFVAVSATIPNAEDIAEWLSDGMRPAVCLKIDESHRPVK
LRKIVLGFPCSSNQTEFKFDLTLNYKIASVIQTYSEQKPTLVFCATRKGVQQAASVLAKD
AKFIMTVEQKQRLQKCANSTKDTKVRDLLMCGVAYHHAGMELSDRKIIEGAFTRGDLPVL
FTTSTLAMGVNLPAHLVVIKSTMHYVGGMFQEYSETDILQMIGRAGRPQFDTTATAVILT
RLSTREKYVQLLNGADTIESSLHKHLVEHLNAEIVLHTITDVKIALEWIRSTFLYIRVLK
NPVHYGFSPGLDTVGIEAKLQELCLKNLNDLSSLDLIKMDEEFNFKPTETGKLMAWYYIA
FDTVKQFSTINGTETLSELITMISGCIEFSDVKLRINEKKILNTLNKDKNRITIRFPMEG
KIKTREMKINCLIQAQLGCIPIQDFTLTQDIGKIFRHGVRVTKWLSDFLASRKNNFPALL
NSLILAKCFRCKLWENSLHVSKQLEKIGVTLSNAMVNAGLTSFKKIEDANARELELILNR
HPPFGNQIKESVLHLPKYKLDIEQLTKYSDTVAEILVTIILTNFEQLQIKRTAPDFHYVT
LIIGDADNQVVFKQKIMDSVLLKNGNWTKKIEVKRALKSDELSINLISSEYVGVDIQQNY
SAFYLGPKRFGNEVVLQRKLEAESSPMYHASSIRSAAARKDTGGACNREITYMKLGNREC
SHHCKNKDGCGHDCCKVGVSQKSELKRDSKFSSYLADLRNRNSISSVPPVKQLKMQIQLN
KSQNVDLKQFVFTPKSLLPALPRSDYVQSSASASREHWNNVNILGRPQNQLQSESYEKSN
FSWEHSVTVSEESHQTMTSKKNLKESLMHNFTNADKSSSWFSEALNVNFELGDEVWDDFD
DDKLIHASSFFTGVESREDLGSGNTCLQSTIECKPLFQNSESKVTSDISKNFCMLQDKSD
VNLQNSAFSTLNAPSEKKLSVQYGNTNTFSFQKRKHPNPLQELKNREFSPNSEIISGSSQ
FIGKENFFICNKERKKEIDVRYLSDDETNDIKPFLGIFDGIF
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaactagctattacaaggttactaatggaagtgccgatgccttggttaaatatt
aaaattgtctatatggctccaataaaagctctgtgcagtcagcgttttgatgattggaaa
gataaatttggacctatagggctcagctgtaaagaactgacaggagatacagtgatggat
gatttatttgaaatacagcatgctcacattattatgaccacaccagaaaaatgggatagc
atgactagaaaatggagagacaactctttagtccaactggtacgactgttcctcattgac
gaggtacatgttgtgaaagatgaaagccgtggtgcaacacttgaggttgtagtcagtcgg
atgaagactatacagtcttctctttcacgtatctcagagaatcctgacatgcttactccc
atgagatttgtggctgtttctgcaacaatcccaaatgctgaggatattgcagaatggctt
tcagatggtatgagacctgctgtatgtctgaaaatagatgaaagtcatcgacctgtgaag
cttcgcaaaatagttcttggatttccctgcagtagcaaccaaacagaattcaaatttgac
ttaactcttaactacaaaatagctagtgttatacaaacatactctgaacaaaaaccaacc
cttgtgttttgtgccacaagaaaaggagtacagcaggctgcttcagttcttgcaaaagat
gctaaatttattatgactgtggaacagaaacaaagattacaaaagtgtgcaaattcaaca
aaagataccaaagtgagagatcttttaatgtgtggtgtggcttatcatcatgctggtatg
gaactatctgatagaaaaataattgaaggagcttttaccaggggagacttaccagtgctt
tttactactagtaccttagctatgggagtaaatttacctgcacacctggtagttataaaa
tctacaatgcactatgttggaggaatgtttcaagaatacagtgaaacagatattctgcaa
atgattgggagagcagggaggcctcaatttgacactacagctacagcagttatcttgact
aggttaagtacaagagagaaatatgtacagctgttaaatggtgcagatacaatagaaagc
agtttgcacaaacatcttgttgagcatttaaatgcagaaatagtgttgcacactatcacg
gatgtgaaaatagctttggaatggatacgatcaactttcctatacatcagagttttgaaa
aatcctgttcattatggtttttcacctggactagacacagttggaattgaagcaaaatta
caagaattgtgtttgaagaatttgaacgatttgtcatctcttgatttgatcaagatggat
gaagaatttaatttcaaacctacagagactgggaaactaatggcttggtactatattgca
tttgatacagtgaaacagttttccacaattaatggaacagaaactttatctgaactgatc
acaatgatatccggctgcattgaattttcagatgtcaagttaagaataaatgagaagaaa
atattgaacactttgaataaagacaagaacaggataactatcagatttccaatggaaggg
aagataaaaacaagagaaatgaaaataaactgtcttattcaggctcaattaggatgcatt
cctattcaagacttcactttgacacaagatataggcaaaattttcaggcatggcgtaaga
gttactaaatggttatctgactttctggcatcacgtaaaaacaatttccctgcattatta
aactctttgattttagctaagtgtttcaggtgcaaactgtgggaaaactctctgcatgta
tccaaacagctagaaaaaattggtgtaacactatcaaatgcaatggtaaatgcaggtctg
acatcatttaaaaaaattgaagatgcaaatgcaagggagcttgaattgattttaaacaga
catcctccttttggaaaccaaataaaagaatctgtgctacacctgccaaaatataaactt
gacattgaacagcttacaaaatacagtgatacagtggctgaaatcttagtgaccatcata
ttaacaaactttgaacagcttcagattaagagaactgcaccagactttcactatgtaacc
ttgatcataggagatgctgataatcaagtggtttttaaacagaaaattatggattctgtc
ttgctgaaaaatggaaattggaccaaaaaaattgaagtgaaaagagctcttaaatctgac
gaacttagcataaatttaattagctctgaatatgttggggtggatattcagcaaaactat
tcagccttttacttaggaccaaaaaggtttggaaatgaagtggttttacaaagaaaatta
gaagctgagtcttcacctatgtatcatgcctcttcaataagatcagcagcagcgagaaag
gatacaggaggtgcctgtaaccgtgagatcacctacatgaaacttgggaacagagaatgc
agccatcactgtaaaaataaagatggatgtggacatgactgctgtaaagttggagtttca
cagaaatctgagttaaagagagattcaaagttttcttcatacctagctgatttaaggaac
agaaactcaatttcatcagttcccccagtaaaacaattaaagatgcagatacagttaaat
aaatctcaaaatgtggatctgaaacaatttgtttttacaccgaaatctttgttgccagca
ttgccaaggtctgactatgtacagtcttctgcctcagcttcacgagaacactggaataat
gttaatatccttggtagacctcagaaccaactgcaatcagagagttatgaaaagagtaat
ttctcttgggaacattctgtgactgtaagtgaggagagccatcagacgatgacgtcaaag
aaaaatcttaaagaatctttaatgcataattttactaatgcagataaaagcagctcttgg
ttttcagaggctttgaatgtgaactttgaattgggagatgaagtttgggatgattttgat
gatgacaaattaatacatgctagcagctttttcactggtgtggagagtagagaagattta
ggatctggaaacacttgccttcaaagtacaatagaatgtaaaccactgtttcagaattca
gagagcaaagtcacaagtgacatttcaaaaaatttttgcatgttacaagataagtctgat
gttaatctacaaaattctgccttttccacattaaatgcaccatcagaaaagaaattatct
gtacaatatggaaatacgaatactttcagctttcaaaaaagaaaacatccaaatcctcta
caagagttgaaaaacagagagttttctcctaactcagaaataatctcaggttcttctcaa
ttcattggaaaggagaatttttttatttgcaacaaagaaaggaaaaaagaaattgatgtc
agatatctttcagatgatgaaaccaatgacattaagccttttcttggaatatttgatggc
attttctaa
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