Trachemys scripta elegans (red-eared slider): 117882101
Help
Entry
117882101 CDS
T07347
Name
(RefSeq) calcium-activated chloride channel regulator 1-like
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117882101
Ion channels [BR:
tst04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
117882101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLCA
VWA_2
VWA
VWA_CoxE
VWA_3
Invasin_D3
Motif
Other DBs
NCBI-GeneID:
117882101
NCBI-ProteinID:
XP_034635973
LinkDB
All DBs
Position
8:complement(79238750..79320002)
Genome browser
AA seq
936 aa
AA seq
DB search
MRVFKSLVLLFLLLVVRGSMVQLKNGGYEDIVIAINPELSEDHNIIRNIQDMVKEASTYL
FNATKQRFFFKAVKIIIPLHWLPKPEYLSVKTESYDKADVIVANPYLKYGDDPYTLQYGG
CGEKGRYIHFTPDFLLNDNLYNIYGSRAKVFVHEWAHLRWGVFDEYNNDAPFYVSVNSGK
ASVEATRCSADITGKYIVQSCTGNSCTTRECKSDEQTKLYEAGCKFVPEKTQNAPASIMY
MQSLPSVVEFCDQSTHNEKATNLQNKMCNYHSTWEVIMNSPDFSNTSPINSASPPFETSF
SLLQTKDRAVCLVLDVSGSMAGNNRIKRLKQAAEIFLLQIIETGSWVGIVTFHSTAQIET
YLQQIINENVRQDLTKYLPISAGGGTNICTGVRKGFEVIKQKYSNLYGSEIVLLTDGEDG
GMSSCLTEVKNSGSIIHTIALGPNAAPELEQFSNMTGGLRFYATDTVDSNSLIDAFSGIS
SGSGNISEQSIQLESTAQSVAVKQWMNGTVTVDSTVGNDTFFVVTWDRSTSSPDILLRDP
KGKEYRTSNFTVSDLNLRTARLNIAGTAEVGDWYYWIQNKHTESQVISMIVTSRAASLAV
PPVTVKALMNKDTNNFPNPMVIYAEVSQGFLPVLGATVMATVEPQTGSAVELRLLDDGSG
ADITKNDGIYSKYFTSFRGNGRYNLKVRVQGKDKTVRLRRRQSRALYVPGYIENGEIKMN
APRPEPSDDEIQAKLGSFNRVASGGSFVMENVPSGGITDVFPPCKIIDLEAQYEEDKIHL
SWTAPGNDFDVGQADRYIIKMSESLLDLRNTFEDATSVNTSSLVPKPAGTKESFQFKPEN
VTIENGTIIYFAIRAIDNASLTSEVSNVVQAAQFVPPKESLPDTLPTEVITKSVPTQESL
PDTIPTEVITNSVPKQGSFLLRFLLMLSMTVSMFQY
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgagggtattcaagagcttggttcttttatttctgctacttgtagtgagaggttctatg
gttcagctgaaaaatggtggctatgaagatattgttattgcaattaaccctgagttatca
gaagatcacaatatcataagaaacatacaggacatggtcaaagaggcttctacttacttg
ttcaatgctacaaaacagagattttttttcaaggctgtaaaaattataattcctctgcat
tggctgccaaaacctgagtatttaagtgtgaaaacagagtcatatgataaggcagatgtt
atcgtggctaatccttacttgaagtacggagatgatccctacacgctgcaatatggagga
tgtggggaaaagggacgatacattcatttcactcccgatttcctgttaaatgacaatttg
tataacatctatggatcacgagccaaagtttttgtccatgaatgggcccatcttcgttgg
ggggtgtttgatgaatacaataatgatgcacctttctatgtgtctgtaaattctggaaaa
gcaagtgttgaagcaacaaggtgttcagctgatatcactgggaaatacatagttcaaagc
tgcacgggaaacagctgcacgacaagagaatgcaaatctgatgaacagacaaagctgtat
gaagctggatgtaaatttgtaccagaaaaaacacaaaatgccccagcatctataatgtat
atgcagagcctcccttctgtggttgaattctgtgatcaaagtactcataatgaaaaggct
acaaatctgcagaacaaaatgtgtaactaccacagcacctgggaagtaattatgaactct
cctgacttcagtaacacctctccaataaatagcgcaagtcctccgtttgagacctccttc
tcattgctgcagaccaaagacagagcagtctgtctggtacttgatgtttctgggagcatg
gctgggaataaccgcattaaacgtctcaaacaagctgcagagatattcctgctacagatt
attgaaacgggttcctgggttggaattgtcacattccattctacagcacaaattgaaact
tatctacaacaaataatcaatgagaatgtacgccaggatcttaccaaatacctgcctata
tcagctggtggaggaactaacatctgcacaggagtacgcaaaggatttgaggtgattaaa
caaaagtactctaatctctatggttctgaaattgtactgctgacagatggagaggatggg
ggtatgagcagttgccttacggaggtgaaaaacagtggctcgatcattcacaccattgcc
ttgggaccaaatgctgctccagaactagaacaattttcaaatatgacgggaggcttaagg
ttttatgccacagatacagtcgactccaatagccttattgatgcattcagtggaatttca
tcaggaagtggaaatatttctgaacagtctattcagcttgaaagtacagctcagagtgtc
gcagtcaagcagtggatgaatggtacagtgactgtagatagcactgtaggaaatgacacc
ttctttgtagttacatgggatcgaagcacatcttcaccagacattttactgagggacccc
aaaggaaaagaatatagaacgtcaaacttcacagttagtgatctaaacctccgaacagct
cgactgaatatagcaggcactgcagaggtgggggattggtattattggattcaaaataag
cacacagagtctcaagtcatatccatgatagtaacctctcgagccgcatctttggctgtg
cctccagtgactgtgaaagccctcatgaataaggatacaaacaacttccctaatccaatg
gtgatttatgcagaagttagtcaaggatttttgcctgttcttggtgcaactgtgatggcc
actgttgaaccacagactggatctgcagtggagctcagactccttgatgatggttcaggt
gctgatattaccaagaatgatggaatctattcaaagtactttacatctttcagaggaaat
ggtagatacaacttaaaagtgcgtgtccaagggaaagataagactgtcagacttcgccgc
aggcagagtcgagccttgtatgttccaggctacatagaaaatggtgaaattaaaatgaat
gcaccgagacctgaacctagtgatgatgaaattcaagcaaagctaggaagtttcaataga
gttgcctctggaggttcttttgtaatggaaaatgttccttcaggaggaattactgatgtg
ttcccaccctgtaaaattattgaccttgaggctcagtatgaagaagataaaattcacttg
tcttggacagctcccgggaatgactttgatgtgggacaagctgacagatacataataaaa
atgagtgaaagtcttctggacttaagaaacacctttgaagatgctacttcagtgaatacc
tctagtctggtacctaaacctgccggcaccaaagaatcatttcagtttaaaccggaaaat
gtcacaatagaaaatggcaccataatctactttgcaatacgtgccattgataatgcctcc
ctgacctcagaggtgtctaatgtagtacaggcagctcagtttgttcctccaaaggaatcc
ttgcctgatacgcttcctactgaagttatcactaagagtgttcctacacaggaatccttg
cctgatacaattcctactgaagttatcactaacagtgttccgaaacagggatccttcctg
ttacgcttcctactgatgttatcaatgacggtgtcaatgtttcaatactag
DBGET
integrated database retrieval system
