Trachemys scripta elegans (red-eared slider): 117882143
Help
Entry
117882143 CDS
T07347
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tst03016
]
117882143 (TRMT13)
Enzymes [BR:
tst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
117882143 (TRMT13)
Transfer RNA biogenesis [BR:
tst03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117882143 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
OrgC
Methyltransf_32
TIP120
Motif
Other DBs
NCBI-GeneID:
117882143
NCBI-ProteinID:
XP_034636040
LinkDB
All DBs
Position
8:complement(71317464..71329526)
Genome browser
AA seq
492 aa
AA seq
DB search
MAAETAAIGSEERRAAEPAAAGGLRAPVPGRCGYFVERKKRFCKMIPAQGRRFCGEHGHQ
EEENDRKRIPCPLDPKHTVYEDQLQKHLKKCNSREKPKPAYFVQDINAGLKDATEILDEQ
QLPISSLSKEELEDLIKKLKKASNGIKPILKDQMLSHQALQEALNDPKNGESAFKHLKQQ
ASILGNMEKLHLLGPGRCFIEFGAGRGKLSHWVDIALQDAENVHFLLVERATTRFKVDGK
HRKRDYIFERLQVDIQHLCLNKVPILEKEKLPVVGIGKHLCGAATDLALRCLVESYATQY
DERNEEPSPKRFKSDKTDIAFNNSADERSGKNVSENWKPVAGIVIALCCHHRCQWKHYVG
REFFRTVGLGPVEFNYFQRMTSWATCGMRETITEASTVDAKSKDQSSDTEEHDQVHNRME
CSSDSLQGLLTVEERKQIGRLCKLLIDQGRIKYLQQRGYTAALQYYTDSTVSLENVLLTA
VPSQSSVPQPTA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagacggctgcgatcgggagcgaggagaggcgggcagccgagccggctgcg
gccggggggctccgggctcctgtgcccggacggtgcggttacttcgtggagcggaagaag
cggttctgcaagatgatcccggctcaggggagacgcttctgcggggagcacggacaccag
gaggaagaaaatgacaggaaaagaattccatgccctcttgacccaaaacacaccgtatat
gaagatcaattacaaaaacatttaaaaaagtgtaattcaagagagaagccgaagcctgcc
tactttgttcaagatattaatgcaggattaaaagatgcaacagaaatacttgacgaacag
cagttaccaatttcttccctgtctaaagaagagttagaggacttgattaaaaagctgaaa
aaagcaagtaatggtataaagccaatacttaaggatcaaatgctgtcccatcaggcctta
caagaagccttaaatgacccaaagaatggagagtctgctttcaagcacttgaaacaacag
gcttccattttaggtaacatggaaaagttacatttgcttgggccaggaagatgttttatt
gagtttggagctggacgaggaaagctgtctcactgggttgatattgccttacaagatgct
gaaaatgttcactttctgcttgttgaaagggcaactacacgattcaaggtagacggtaaa
cacagaaaaagagactacatatttgaaaggcttcaagttgatatccagcacttatgttta
aataaagtacctattcttgagaaagaaaagcttcctgtggtaggaattggaaagcattta
tgtggtgctgcaacagatcttgctctgagatgtttggttgaaagttacgcaacccaatat
gatgaaagaaatgaagaaccttcacctaaacgtttcaagagtgataaaacagacatagct
tttaacaattctgctgatgaaaggagtggaaagaatgtttcagaaaactggaagcctgtg
gctggaattgttattgcactgtgttgccaccacaggtgtcagtggaagcattatgtaggc
cgagagttctttagaacagtgggacttgggccagtggaatttaattattttcagagaatg
actagctgggccacttgtggcatgcgagaaactatcactgaagcctctaccgttgatgca
aagagcaaagaccaaagcagtgatacagaagaacatgaccaagtacacaacagaatggag
tgcagttctgatagtctgcaagggctacttaccgttgaagaacgaaagcagataggtcgt
ctttgtaaactcttgattgaccagggacggatcaaatatttacaacagagagggtacact
gctgcattacaatactatacagattctactgtttccttggagaatgtactcttgacagct
gtaccaagtcaatcttcagtacctcagccaactgcataa
DBGET
integrated database retrieval system
