Trachemys scripta elegans (red-eared slider): 117882223
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Entry
117882223 CDS
T07347
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117882223
Cell adhesion molecules [BR:
tst04515
]
Cadherins
Protocadherins
117882223
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
117882223
NCBI-ProteinID:
XP_034636190
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Position
8:36882660..36891951
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AA seq
1001 aa
AA seq
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MPSARGDSASSRWVARVVSGEPYPWRRCRSRGPGAMGTGVWGNGWTWSWQMLLLLVTSCQ
EPAVGQLRYSVPEELEHGAFVANIAEDLGLDVSKLSTRRFRIVSRAGTKQHLEVNLENGI
LFVNEKIDREEVCEASGACLLHLQLVIESPLALYRVEVEVLDINDNAPSFPWPEYVLEVT
ESALPGARFPLESAQDPDVGTNSLRTYQLSPNGFFSLEVQTRSDGSKFAELVLERALDRE
QQRSHRMLLTALDGGLPERSGTAGILVTVLDANDNVPAFDQPSYGVSLPEDAPPGTLVIK
LNATDLDEGTNGEIEYSFSGHAPPRVRQLFSVEPRSGQVRLAGPLDYERARLHELYVQAK
DRGPSAVAVHCRVLVHLLDVNDNAPEVSLTSVSTPVLEDAPPGTVIAVISVLDRDSGDNG
QVSCEIPRNVPFQLQAAFRNYYTLVTTAALDREAVPEYNVSITARDMGSPALLTRKTLTV
QVSDINDNAPRFLQPSYSVYVLENNAPGASICSVSALDPDCRQNAYLSYSIVEGHIQGMP
VATYVSINSDSGHMYALRSLDYEQIRNFQVQVQAQDAGFPPLSSNVTVNVFVLDQNDNAP
VIVSPVPRNGSLATDVMPRSADPGYLVGKVSAVDADSGQNSRLSYQILQATDPSLFSVAL
YTGELRTIRAFLDKDATRHRLVIQVRDNGQPPLSASVSLLLSVVESVPETLSDFNELSLN
PELSSSTLTLYLIVSLGSVSFTFLVAIIILTAIKCHKDRHSLHGYGCSLPACCCVKARAS
ADVFKNSNIKPQLSSGNKVPTNCLDVAGSGPPGYCYKVCLTPESAKSDFMFLKPYSPSPP
RNNEKAAENLPGPGRKPRLANNTVSAPSQIKQPNTDWLPTKTQRSALKSSQSLEDVGGVR
RGVQKEHDRLRTLVTPVSEFQKASGASNSIWTPRYGPLYPPHIPYQHNVYIPGTPTMLAN
KEGPHCLDPEDKNSFSTFGKRKKMATYCDIGDSMIINNDLK
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcccggggagacagcgcaagctcccgctgggtggcacgggtggtctcaggt
gagccttatccctggaggcgctgccggagcaggggccccggcgccatggggactggagtc
tggggcaacggctggacttggagctggcagatgctgttgctcctggtgacttcatgccag
gagccggcggtcggccagctgcgctattctgttcccgaggagctggagcacggcgccttc
gtggctaacatcgccgaggacctgggtctggacgtgtccaagctgtcgacgcggcggttc
cgcatagtgtcccgggccggcaccaagcagcacctggaggtgaacttggagaacgggatc
ctcttcgtcaacgagaagatcgaccgcgaggaggtgtgcgaggccagcggggcctgcctg
ctgcatctgcagctggtgatcgagagcccgctggcgctgtaccgcgtggaggtggaggtg
ctggacatcaacgacaacgcgcccagctttccctggccggagtacgtgctggaggtgacc
gagtcggcgctacccggcgcccgcttccctctggagagcgcgcaagacccggacgtgggc
accaactccctgcgcacctaccaactcagccccaacggctttttctcgctcgaggtgcag
acccgcagcgacggcagcaagttcgccgagctggtgctggagcgagccctggaccgcgag
cagcagcgcagccaccgcatgctgctcaccgccctggacggcggcctcccggagcggtcg
ggcacggccggaatcctcgtcaccgtgctggacgccaacgacaacgtgccggccttcgac
cagccctcgtacggagtgagcctgcccgaggacgcgcccccgggcacgctggtcatcaag
ctcaacgccacggacctggacgagggcacgaacggagagatcgagtactccttcagcggc
cacgcgccgccccgggtgcgccagctcttcagcgtggagccgcgcagcggccaggtgcgc
ctggccggcccgctggactacgagcgcgcgcgcttgcacgagctctatgtgcaggccaag
gaccgcggcccctcggcggtggccgtgcactgccgggtgctggtgcacctgctcgacgtc
aacgacaacgcgcctgaggtgagcctcacctcggtctccacgccggtgctggaggatgcg
ccgccgggcaccgtgatcgccgtgatcagcgtgctggaccgggactccggagacaacggg
caggtgagctgcgagatcccccgcaacgtgcccttccagctccaggccgccttccgcaac
tactacacgctggtcaccaccgcggcgctggaccgcgaggcagtgcctgagtacaacgtc
agcatcacggcgcgggacatgggctcgcctgcgctgctcaccaggaagaccctgacagtc
caggtgtccgacatcaacgacaacgcgccccgcttcctgcagccctcctacagcgtctat
gtgctggagaacaacgccccgggcgcctccatctgctcggtcagcgccctggaccccgac
tgccggcagaacgcctacctgtcctactctattgtcgaggggcacatccagggcatgccc
gtggccacctacgtctccatcaactcggacagcgggcacatgtacgcgctgcgctcgcta
gactacgagcagatccgcaacttccaggtgcaggtgcaggcgcaggacgcgggcttcccc
ccgctcagcagcaatgtcactgtcaacgtattcgtcctggaccagaatgacaacgcgccg
gtcatcgtctcgcccgtgccccgcaacggctcgcttgccacagatgtgatgccccgctcg
gccgaccccggctacctggtggggaaggtgtctgccgtagacgcggactccgggcagaat
tcccggctctcctaccagatcctgcaggccactgaccccagcctcttcagcgtggccctg
tacactggcgagctccgcaccatccgagccttcctggacaaagatgccaccaggcaccgc
ttggtcatccaggtgcgggacaacgggcagccgccgctctctgcctcggtgtccctactg
ctgtccgtagtggagagcgtgccggagaccctgtccgatttcaacgagctctccctgaac
cccgagctctcctcctccacgctcaccctctacctcatcgtctccttggggtccgtgtct
ttcacctttctggtggccatcatcatcctcacggccatcaagtgccacaaggaccggcac
tcccttcatggctacggctgctcccttcctgcctgctgctgcgtgaaggccagggcctca
gccgacgtcttcaaaaattccaacattaagccccagctctcctcgggcaacaaagtgccc
accaactgcctggatgtggcgggcagcggccctccgggctactgctacaaagtctgcctg
accccggagtccgccaagagcgacttcatgttcctaaagccctacagcccgagtcccccg
aggaacaacgagaaagccgccgagaacttaccagggccgggaaggaagccccgactggcc
aataacaccgtcagtgcccccagccagatcaaacagcccaatacggactggctgcctaca
aaaacccagcgatctgccctgaaaagttcgcagagtctggaagacgtagggggagtccgc
agaggagtccagaaagagcatgacaggctgcgtaccctggtcactccagtctccgaattc
cagaaagcatccggggcctccaacagcatttggacccccaggtacggccccctgtacccg
ccgcacatcccgtaccagcacaacgtttatataccagggaccccaaccatgctggcaaac
aaggaggggccccactgcctggatccggaggacaagaacagtttctccacttttgggaag
aggaagaaaatggccacctattgcgacataggcgacagcatgattatcaacaatgaccta
aaataa
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