KEGG   Trachemys scripta elegans (red-eared slider): 117882223
Entry
117882223         CDS       T07347                                 
Name
(RefSeq) protocadherin-10-like
  KO
K16499  protocadherin delta 2
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:tst04515]
    117882223
Cell adhesion molecules [BR:tst04515]
 Cadherins
  Protocadherins
   117882223
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_tail Cadherin_CELSR2_9th
Other DBs
NCBI-GeneID: 117882223
NCBI-ProteinID: XP_034636190
LinkDB
Position
8:36882660..36891951
AA seq 1001 aa
MPSARGDSASSRWVARVVSGEPYPWRRCRSRGPGAMGTGVWGNGWTWSWQMLLLLVTSCQ
EPAVGQLRYSVPEELEHGAFVANIAEDLGLDVSKLSTRRFRIVSRAGTKQHLEVNLENGI
LFVNEKIDREEVCEASGACLLHLQLVIESPLALYRVEVEVLDINDNAPSFPWPEYVLEVT
ESALPGARFPLESAQDPDVGTNSLRTYQLSPNGFFSLEVQTRSDGSKFAELVLERALDRE
QQRSHRMLLTALDGGLPERSGTAGILVTVLDANDNVPAFDQPSYGVSLPEDAPPGTLVIK
LNATDLDEGTNGEIEYSFSGHAPPRVRQLFSVEPRSGQVRLAGPLDYERARLHELYVQAK
DRGPSAVAVHCRVLVHLLDVNDNAPEVSLTSVSTPVLEDAPPGTVIAVISVLDRDSGDNG
QVSCEIPRNVPFQLQAAFRNYYTLVTTAALDREAVPEYNVSITARDMGSPALLTRKTLTV
QVSDINDNAPRFLQPSYSVYVLENNAPGASICSVSALDPDCRQNAYLSYSIVEGHIQGMP
VATYVSINSDSGHMYALRSLDYEQIRNFQVQVQAQDAGFPPLSSNVTVNVFVLDQNDNAP
VIVSPVPRNGSLATDVMPRSADPGYLVGKVSAVDADSGQNSRLSYQILQATDPSLFSVAL
YTGELRTIRAFLDKDATRHRLVIQVRDNGQPPLSASVSLLLSVVESVPETLSDFNELSLN
PELSSSTLTLYLIVSLGSVSFTFLVAIIILTAIKCHKDRHSLHGYGCSLPACCCVKARAS
ADVFKNSNIKPQLSSGNKVPTNCLDVAGSGPPGYCYKVCLTPESAKSDFMFLKPYSPSPP
RNNEKAAENLPGPGRKPRLANNTVSAPSQIKQPNTDWLPTKTQRSALKSSQSLEDVGGVR
RGVQKEHDRLRTLVTPVSEFQKASGASNSIWTPRYGPLYPPHIPYQHNVYIPGTPTMLAN
KEGPHCLDPEDKNSFSTFGKRKKMATYCDIGDSMIINNDLK
NT seq 3006 nt   +upstreamnt  +downstreamnt
atgccttctgcccggggagacagcgcaagctcccgctgggtggcacgggtggtctcaggt
gagccttatccctggaggcgctgccggagcaggggccccggcgccatggggactggagtc
tggggcaacggctggacttggagctggcagatgctgttgctcctggtgacttcatgccag
gagccggcggtcggccagctgcgctattctgttcccgaggagctggagcacggcgccttc
gtggctaacatcgccgaggacctgggtctggacgtgtccaagctgtcgacgcggcggttc
cgcatagtgtcccgggccggcaccaagcagcacctggaggtgaacttggagaacgggatc
ctcttcgtcaacgagaagatcgaccgcgaggaggtgtgcgaggccagcggggcctgcctg
ctgcatctgcagctggtgatcgagagcccgctggcgctgtaccgcgtggaggtggaggtg
ctggacatcaacgacaacgcgcccagctttccctggccggagtacgtgctggaggtgacc
gagtcggcgctacccggcgcccgcttccctctggagagcgcgcaagacccggacgtgggc
accaactccctgcgcacctaccaactcagccccaacggctttttctcgctcgaggtgcag
acccgcagcgacggcagcaagttcgccgagctggtgctggagcgagccctggaccgcgag
cagcagcgcagccaccgcatgctgctcaccgccctggacggcggcctcccggagcggtcg
ggcacggccggaatcctcgtcaccgtgctggacgccaacgacaacgtgccggccttcgac
cagccctcgtacggagtgagcctgcccgaggacgcgcccccgggcacgctggtcatcaag
ctcaacgccacggacctggacgagggcacgaacggagagatcgagtactccttcagcggc
cacgcgccgccccgggtgcgccagctcttcagcgtggagccgcgcagcggccaggtgcgc
ctggccggcccgctggactacgagcgcgcgcgcttgcacgagctctatgtgcaggccaag
gaccgcggcccctcggcggtggccgtgcactgccgggtgctggtgcacctgctcgacgtc
aacgacaacgcgcctgaggtgagcctcacctcggtctccacgccggtgctggaggatgcg
ccgccgggcaccgtgatcgccgtgatcagcgtgctggaccgggactccggagacaacggg
caggtgagctgcgagatcccccgcaacgtgcccttccagctccaggccgccttccgcaac
tactacacgctggtcaccaccgcggcgctggaccgcgaggcagtgcctgagtacaacgtc
agcatcacggcgcgggacatgggctcgcctgcgctgctcaccaggaagaccctgacagtc
caggtgtccgacatcaacgacaacgcgccccgcttcctgcagccctcctacagcgtctat
gtgctggagaacaacgccccgggcgcctccatctgctcggtcagcgccctggaccccgac
tgccggcagaacgcctacctgtcctactctattgtcgaggggcacatccagggcatgccc
gtggccacctacgtctccatcaactcggacagcgggcacatgtacgcgctgcgctcgcta
gactacgagcagatccgcaacttccaggtgcaggtgcaggcgcaggacgcgggcttcccc
ccgctcagcagcaatgtcactgtcaacgtattcgtcctggaccagaatgacaacgcgccg
gtcatcgtctcgcccgtgccccgcaacggctcgcttgccacagatgtgatgccccgctcg
gccgaccccggctacctggtggggaaggtgtctgccgtagacgcggactccgggcagaat
tcccggctctcctaccagatcctgcaggccactgaccccagcctcttcagcgtggccctg
tacactggcgagctccgcaccatccgagccttcctggacaaagatgccaccaggcaccgc
ttggtcatccaggtgcgggacaacgggcagccgccgctctctgcctcggtgtccctactg
ctgtccgtagtggagagcgtgccggagaccctgtccgatttcaacgagctctccctgaac
cccgagctctcctcctccacgctcaccctctacctcatcgtctccttggggtccgtgtct
ttcacctttctggtggccatcatcatcctcacggccatcaagtgccacaaggaccggcac
tcccttcatggctacggctgctcccttcctgcctgctgctgcgtgaaggccagggcctca
gccgacgtcttcaaaaattccaacattaagccccagctctcctcgggcaacaaagtgccc
accaactgcctggatgtggcgggcagcggccctccgggctactgctacaaagtctgcctg
accccggagtccgccaagagcgacttcatgttcctaaagccctacagcccgagtcccccg
aggaacaacgagaaagccgccgagaacttaccagggccgggaaggaagccccgactggcc
aataacaccgtcagtgcccccagccagatcaaacagcccaatacggactggctgcctaca
aaaacccagcgatctgccctgaaaagttcgcagagtctggaagacgtagggggagtccgc
agaggagtccagaaagagcatgacaggctgcgtaccctggtcactccagtctccgaattc
cagaaagcatccggggcctccaacagcatttggacccccaggtacggccccctgtacccg
ccgcacatcccgtaccagcacaacgtttatataccagggaccccaaccatgctggcaaac
aaggaggggccccactgcctggatccggaggacaagaacagtttctccacttttgggaag
aggaagaaaatggccacctattgcgacataggcgacagcatgattatcaacaatgaccta
aaataa

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