Trachemys scripta elegans (red-eared slider): 117882224
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Entry
117882224 CDS
T07347
Name
(RefSeq) vitellogenin-2-like
Organism
tst
Trachemys scripta elegans (red-eared slider)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vitellogenin_N
Vit_open_b-sht
Vit_b-sht_shell
VWD
Motif
Other DBs
NCBI-GeneID:
117882224
NCBI-ProteinID:
XP_034636191
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Position
8:80388345..80416031
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AA seq
1822 aa
AA seq
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MRGIILALAFTLVGSEKYDPEPDFSSSKIYLYNYEGLTLNGLPEPGLARAGLRLSCKVEI
SVLSQRNHLLKIRSPQLEEYNGIWPRDPFIRASKLTQMIASYLTKPFKFEYSNGRVGNIY
APEDTPITCINLVRGILNMLQITIKKSQNAYDLQEAGIGGVCLTRYVIQEDRRNNRVSIT
KTKDLNNCQDKVVKDIGMTYIRPCPSCPLKEKIVKGTAAFTYKLKYADSGTLITEAVSQQ
VYQISPFNEPTGVAVTEARQELTLVEVKNEHVSPPEIQLQNFGGLPYRFSPLLLQMPIQL
IKTKNPEQRIVETLQQVIQDNQQELHGDAPYKFLELIQLCRVASPDTLESVFKQFSDKFH
HRIWLLSGITMAGTIDSLKFLKLRIRNDDFKYIEALLTVSFALHLTKADGHTIAVAADLV
TSSRLERIPMLRQIAYLGYASMVNRYCSLASSCPNEALQPLHDLAAEAASKGNEDDIVLA
LKAIGNAGEPASIKRILKFLPVFSSGASNFPVHIQVEAVMALRQIGWKDSRKVQDILLQI
FVDHSLPPEVRMMACVVIFETGPALPLVITMANVILKETNMQVASFVYSHMKALSRIGFP
RFYNVSAACNIAIKLLSPRLDRLSYRYSKVIPLGGYYSSYQAGAFGKIFLMNSPRTMFPS
ALISSWIVNYAGAATSLLEVGVRAEGLTDIIRKQNIPFAEYSTYRKIKEIGKTLLGWREL
PSENPVLSAYLKLFGQELAFADINKDLIQQAMKLVTGPADRHTWLKRVIHQIQNGIAGRW
VQPLYSGEFRHIVPITVGLPLEYSLYTTALAHATARVDVKLSPSLSGDFRPSQLYESSLQ
LRADISPSIYFNSVAMMGTNTEYFQSSIEIHTKLRVQAPLKFDAKIDMKEKSFKFGTTPC
QQETEIAMGRHKAFAVSRNIGEPGTVKKIPVLPEGTGSNILKEHFKSSERTSREGAVTQR
EASDILPKKYSYGPEQELHHSAEGKTYTQAICVKVTRFGCQACFYRRARDASFLKNTYFH
RLIGEHEAKIVLKPAPTDAAIDKIQLEIQAGSRAASKIIQVVTLESEEEDDSSPDDVVQM
KLKKILGIENVFKVGNRTQRHKKGKTQITEFRVEPNAKYPSSSSSSSADTSSSSSSSSSS
PSSSPSSSSSSSPSGKKVKNQDAKDKTLQPRNRDESSSSSSKSSSKSSSSSRSSSKSSSS
SSGDSSDSSSSSRSSSSSDSGSSSSDSGSSDSTSSSSSSGNKAPRPGSRHQLVREPNSSN
SSSSSSSSSSSDSEYSKRQRTPEIYQYRFKSAHTQEYPRKKVPGSSSASSSSSSSSSTSS
SSSSSSSSSSEDTNTAGSRPKFLGDSKAPDLAVILRAFRNDRKLVGFQLVLYTDLYSTRP
RIQVFVSNITGSSRWKICADASIINAHKAAGYLKWGRDCQDYRISSEFVTGRFADHPAMQ
VKLEWPKVPSRVKSVASWFYNFIPGAAYILGYSEIQQKNPSQQAKLIVALTSPRTCDFVA
KLPELTIYNRAFRLPLSLPVGPSLPASALQPPIWNFFSEAPSAVLEHLKARCSVSQDKIT
TFNEVQFNYSLPTNCYHILAQDCSPELKFLVMMKNAEESADLKAINIKLGSHEIDMYPAN
GLLNLMVNGVETPVENITYTSDFDASLMISSEKKGLSLVAPDYGIDKLYFDGRTFKVQVA
FWMAGKTCGICGKYDAENKQEFQMPSGYVAKDAVSFGQSWILSEKPCAGACKLQRSLVKL
EKTIRLEGEDSKCYPVEPVLRCMKGCSATETTPVTVGFHCLPADSAASLVEGQMKLDQKS
EDIQDTVEAHTACSCEELQCIA
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgaggggaatcatactagcgctagcgttcacccttgtggggagtgaaaagtatgaccct
gagcctgattttagtagcagcaagatctacttgtacaactatgagggccttaccctgaat
ggactgccagagcctggtttggcaagagctgggctgagactgtcctgtaaagtagagatc
agcgtattgtcacagaggaatcacctcctcaagatccgatctccacagctggaggaatac
aatgggatctggcccagagatccattcattcgagcttccaaactcactcagatgatcgct
tcgtatctcaccaaaccctttaagtttgaatacagcaatgggcgggttggaaacatttat
gccccagaagatacccccatcacgtgcattaacctagtgagaggaattctgaacatgttg
cagataactatcaaaaagtcacagaatgcatatgacttgcaagaggctgggattggaggc
gtctgccttacaaggtatgttatccaggaagacaggaggaataaccgagtctctattacc
aaaaccaaagacctcaacaactgccaggacaaagtggtgaaggatattggaatgacttac
atccgcccttgtccttcttgcccattgaaagaaaagattgtaaaaggaactgctgcattc
acctacaaattgaaatatgcagattctggtaccctgatcacagaagctgtgtcccagcaa
gtctatcagatctcccctttcaatgaacccactggtgttgctgtcacggaggcaagacaa
gaacttaccttggttgaagtgaaaaatgaacatgtgagccctccagaaattcagctgcag
aactttggaggcctaccttatcgtttctcaccactactgctccagatgccaattcagcta
atcaagacgaaaaaccctgagcaacggatcgtggaaacattgcaacaagtaatccaggac
aaccagcaagagctccatggggatgctccatacaaattcttagagcttatccaactgtgt
cgggtagcaagtcctgataccttggagtctgtctttaagcaattttcagataaatttcat
cacaggatttggctgctgagtggaattactatggcaggcaccatcgattcactgaagttc
cttaagctgagaattcgcaatgatgactttaagtacattgaggcccttctgactgtttct
tttgccctccatttaacaaaagcagatggccatactattgcagtagcagcagatctagtg
accagctcccgacttgagagaattcccatgcttcgccagattgcttatttgggatatgct
tccatggtaaacagatactgttctctggcttcatcttgccctaatgaagctcttcagccc
ctccatgaccttgcagccgaggcagccagcaagggcaatgaagatgacattgtattagct
ctgaaagccattggcaatgcaggagaaccagccagtatcaagcgaatcctgaagttctta
ccagtattttcatctggtgcttctaatttcccagtccatattcaggtcgaagctgtgatg
gccttgaggcagataggctggaaggactccagaaaggtgcaggacattcttctccagatc
tttgtggatcattcacttcctcctgaagtccgaatgatggcttgcgttgtcatatttgaa
actgggcctgcacttcctctggtaataactatggctaacgtgatactgaaagagaccaat
atgcaagttgccagttttgtatattcccacatgaaagctttgtcaagaattggattccca
cgcttctataatgtatctgctgcttgcaacattgccattaaactgctgagccccagactt
gacagactgagctatcgttacagtaaagttattcctcttggtggttactacagtagctat
caggctggtgcatttggaaagatcttccttatgaatagtccaagaacaatgttcccatca
gctttaatttccagttggattgtaaactatgcaggtgcagctactagcttgctagaggtt
ggtgtccgtgcagaaggtcttacggatattataaggaaacaaaacatcccatttgcagaa
tattccacatacagaaagataaaggagattgggaaaacactgctgggatggagggagttg
ccttcagaaaaccctgtgttatcagcttacttaaaactatttggccaagagctggccttt
gctgacatcaacaaggatctcattcagcaggctatgaagcttgtgactggaccagcagac
agacacacatggctgaagagagtgatccatcaaatccaaaatggcattgcaggacgatgg
gttcagccattatattcaggagaatttcggcacatcgtccctatcactgttggtctgcca
ttggaatacagtttatatactactgctctggcacatgcaacggcccgtgttgatgtaaag
ctgtccccttctttatctggtgattttagaccttcacagttgtatgaatccagcttgcaa
cttcgtgctgatatcagcccaagtatctactttaactcagtggcaatgatgggaaccaac
acagaatactttcagtcttctattgaaattcacaccaaactccgtgtacaagctccattg
aaatttgatgccaagatagacatgaaggaaaaaagttttaagttcggaacaaccccatgc
caacaggagactgagatagcgatgggaaggcataaggcttttgctgtatcaagaaatata
ggagaaccaggcacagtgaagaagattccagtactcccagaaggtactggatcaaatatt
ctgaaggagcatttcaaatcatctgaaagaacttcgagagaaggtgccgtgacgcaaaga
gaggcttctgacatcctacctaagaaatattcctatggtcctgagcaggaacttcaccac
agtgcagaaggaaaaacatatactcaagccatttgtgtcaaagtgactcgttttggttgt
caggcctgtttttacaggagagcacgagatgcctcttttttaaaaaatacatattttcac
cgattaattggagaacatgaagcgaaaatagttttgaaaccagcccctacagatgcagct
atagacaaaatacagctggagattcaggcaggatctagagcagcttccaaaataatccaa
gtggtaaccctagagtccgaggaagaagatgactcatctccagatgacgtggttcaaatg
aaactgaagaagatcctaggaattgaaaatgtgtttaaggttggaaatagaactcagcgg
cacaagaaaggaaagacccagataacagagttccgggtagagcccaatgctaaatatcca
tctagttcatcttcttcatccgccgacacttcctcctcttcttcctcttcttcttcctcc
ccttcttcctccccttcttcttcctcttcttcctccccttctggcaagaaggtcaaaaac
caagatgcgaaagacaaaacattacaacctagaaacagagatgagagcagcagcagcagc
agtaaaagcagcagcaaaagcagcagtagcagccgtagcagcagcaaaagcagcagcagc
agcagcggtgacagcagtgacagcagcagcagcagccgtagcagcagcagcagcgacagt
ggcagcagcagcagcgacagtggcagcagtgacagcaccagcagcagcagcagcagcggc
aataaagcacctcgacctggaagcaggcatcaactcgtcagagaaccgaacagcagcaac
agcagcagcagcagcagcagcagcagcagcagcgatagcgagtattccaaaagacagaga
actccagagatctatcagtatcgcttcaagtcagcacatacacaggagtatcccagaaag
aaagtcccaggcagcagcagcgccagcagcagcagcagctcctcctcctctacctcctcc
tccagctctagttctagttccagtagcagcgaagacaccaacacagcaggttcccggcct
aaatttttgggagacagtaaagcaccagatctggctgttattcttcgtgcttttcgaaat
gacagaaagctggtaggcttccagctcgtgctatacacagatttatactccaccagaccc
aggatacaagtgtttgtgtcaaacatcacaggatcaagcagatggaaaatctgcgctgac
gcttcaatcattaatgctcacaaggcagcgggttatctgaaatggggccgggattgccag
gactacaggatttcttcagagtttgtaactggccggtttgctgatcacccagccatgcag
gtgaaactggagtggcctaaagttccttcaagagtcaaatcagttgccagctggttttac
aatttcatcccaggagctgcctatatactaggctactctgaaatacagcaaaaaaatcct
tctcaacaggccaagttgattgtggctctaacttctccaaggacttgtgattttgtcgcc
aaactgcctgagctgaccatttataacagagccttcaggctgccgttatcattgcctgta
gggccatctctaccagcctcagcactgcagcccccgatctggaatttcttttctgaagca
ccatccgcagtcctggagcatcttaaagctcgttgctcagtttcccaagacaagatcaca
accttcaatgaggtacagtttaactactcactgcccacaaactgctaccatatcttggcc
caggattgtagcccagaactgaagttcctggtaatgatgaagaatgcagaagaatctgct
gaccttaaagcaattaatatcaagcttggcagtcatgaaattgacatgtatccggcaaat
ggacttcttaacctcatggtcaatggtgttgaaaccccagtggaaaatatcacatataca
tctgactttgatgcttctctgatgatcagcagtgagaagaaaggtctatcacttgtggct
cctgactatggcattgataaactatattttgatggacgtacattcaaggttcaagttgct
ttctggatggcagggaaaacatgtggcatttgtggaaaatatgatgctgaaaataaacag
gaatttcagatgcccagtggatatgtagctaaagatgcagtgagctttgggcagtcttgg
attctgtcagaaaagccttgtgctggcgcctgtaaattgcagcggtcacttgtgaaactt
gagaaaacaattcggcttgagggcgaagactcaaaatgctaccctgttgagcctgtgctg
cgctgcatgaaaggatgttcagcaactgagaccaccccagttactgttggcttccattgt
ctgccagctgattcagctgccagcttagttgagggacagatgaagcttgaccagaagtca
gaggatatacaggacacagttgaagcccacacagcatgttcatgcgaggaactacagtgc
attgcatga
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integrated database retrieval system
