Trachemys scripta elegans (red-eared slider): 117882254
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Entry
117882254 CDS
T07347
Symbol
PDLIM7
Name
(RefSeq) PDZ and LIM domain protein 7 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117882254 (PDLIM7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117882254 (PDLIM7)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117882254 (PDLIM7)
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
PDZ_2
DUF4749
Motif
Other DBs
NCBI-GeneID:
117882254
NCBI-ProteinID:
XP_034636270
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Position
8:complement(746617..767305)
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AA seq
516 aa
AA seq
DB search
MSSMDSYKVMLDGPAPWGFRLQGGKDFNMPLSISRLTPGGKAAQAGVGVGDWVLSIDGEN
TSSMTHIEAQNKIRACGDQLSLSLSRVQCLLGKPHKESFPCSQPPKYNFVPSTTLNKTAR
PFGASPTPNSLPGLVTKPVTYTAPACTPQHNGCRTLTSQVGASPSLPEGKTQPRGDLGRS
YMEDEHALRLMSPPTGLPNDSSKKRLVEDTEDWQPRTGTTQSRSFRILAHLTGTEFMQDP
DDEHVRKASQVSGLDPSAVAVLKVEPDHGSAAPRPPAAPGPASRPPWAVDPSFAERYAPD
KTSTVLSKHSQPAMPTPMQNRSSIVQAAQQPPEGTSKTPICYQCNKVIRGRYLVALGHYY
HPEEFACCQCRKVLDEGGFFEEKGSVFCPKCYDMRYAPSCAKCKKKIGGEIMHALKMTWH
VQCFTCAACRTPIRNRAFYMEEGQPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFSW
HDTCFVCAICQVSLEGKTFYSKKDKPLCKSHAFSHV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatggactcctataaagtgatgctggatgggccggcgccctgggggttcagg
ctgcaggggggcaaggacttcaacatgcccctctccatctccaggctgacccctggtggc
aaggcagcccaggccggcgtgggagtgggcgactgggtgctgagcatcgatggggagaac
accagtagcatgactcacatcgaagcgcagaacaagatccgcgcctgcggagaccagctt
tccctcagcctgagcagagtccagtgcctcctggggaagccacacaaggagtcattcccc
tgctctcagcccccgaagtataacttcgttcctagcaccaccctcaacaaaacggcccgg
cccttcggggccagccccacgcccaactcgctgcctgggctggtgacgaaacctgtgacg
tacacggcccccgcctgcaccccccagcacaatgggtgcagaaccttgacaagtcaggtc
ggtgccagccccagcctgccagaggggaaaactcagccccgtggagacctgggccgctcc
tacatggaggatgagcacgctctgcggctaatgagcccccccaccggcctgcccaatgac
tccagcaaaaagcgtctggttgaggatacggaggactggcagcctcgcactggcacaacc
cagtcccgctccttccgcatcctggcccacctcacgggcactgagttcatgcaagatcca
gatgatgagcatgttagaaaagccagccaggtgtctgggctggacccgtctgcggtggca
gtgctgaaggtggagcctgatcacggttcggcagctcccaggcccccagctgctccgggc
cctgccagccgccccccctgggctgtggacccctcctttgctgagcgctatgcgcccgac
aagaccagcaccgtgctgagcaaacacagccagccggccatgcccacgcccatgcagaac
cgcagctccatcgtccaggccgcacagcagccccccgagggcaccagcaaaacccccatc
tgctaccagtgcaacaaggtcatcaggggacgctacctggtggccctggggcattactac
cacccggaggagttcgcatgctgccagtgcaggaaggtgctggatgaggggggcttcttt
gaggagaagggctcggtcttctgccccaagtgctacgacatgcgctatgcccccagctgt
gccaagtgcaagaagaagattggtggggagatcatgcatgcgctgaagatgacgtggcac
gtgcagtgcttcacctgcgctgcctgcagaactcccatccgcaaccgcgccttctacatg
gaggaggggcagccctactgcgagagagactacgagaagatgtttggcacaaaatgccgt
ggctgtgacttcaagattgatgctggtgaccggttcctggaggcgctgggattcagctgg
catgacacctgcttcgtctgtgcgatctgccaggtcagcctggaagggaagacgttctac
tccaagaaggacaaacccctctgcaagagccatgccttctcccatgtttaa
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