Trachemys scripta elegans (red-eared slider): 117882256
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Entry
117882256 CDS
T07347
Symbol
GABRA6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04080
Neuroactive ligand-receptor interaction
tst04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117882256 (GABRA6)
04082 Neuroactive ligand signaling
117882256 (GABRA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117882256 (GABRA6)
Ion channels [BR:
tst04040
]
Ligand-gated channels
GABA-A
117882256 (GABRA6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Cyclin_N
CytochromB561_N
DUF4396
Motif
Other DBs
NCBI-GeneID:
117882256
NCBI-ProteinID:
XP_034636289
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All DBs
Position
8:23837458..23861912
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AA seq
458 aa
AA seq
DB search
MALLFSWMCITICVDKALGSQTDEGKLYSENITRILDKLLDGYDNRLRPGFGGAVTEVKT
DIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFSGPTEILRLNNLMVSKIWTPDTFFRN
GKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYP
KSEIIYTWKKGPLYSVEVPQESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKM
GYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQRAMRKAARAAALAAALSAATVPAEDEI
VSHSDSNCNLKKRMNSTTSQMDQSPEASIMSNSASQGQPTSIPPPAPPLPPPPPPAIGGT
SKIDQYSRILFPVAFAGFNLVYWVVYLSKDTMEVSTSV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttgttctcttggatgtgcatcactatctgtgtagacaaggcgctggggagc
cagactgatgaagggaaactgtactctgaaaacatcacccgaattctggataagttgttg
gatggatatgacaacaggctccgacctggatttggaggtgctgttacagaagtcaaaacg
gatatctatgtgaccagcttcggtcccgtgtcagacgtggagatggaatacacaatggat
gttttctttcggcagacttggactgatgagaggttgaagtttagtgggccaactgaaatt
cttagattgaacaatttaatggtcagtaagatctggacaccagacaccttttttagaaat
ggaaaaaagtcaattgctcataatatgacaactcctaacaaacttttcagaattatgcag
aatggaactattctctatacgatgagactgaccattaatgctgattgtcccatgcggctg
gtaaacttccctatggatgggcatgcttgtccattgaagtttgggagctatgcctatcca
aaaagtgaaatcatttacacatggaaaaagggacctctgtattcagtagaagtaccacaa
gagtcttccagtctcctccagtatgatcttataggacaaacagtgtctagtgaaacaatt
aaatctaacacaggtgaatacgtaataatgacagtttatttccacttgcaaaggaagatg
ggctacttcatgatacagatttatactccctgcattatgacagtcattctttctcaggtg
tctttctggattaataaggaatctgttccagctagaacagtttttgggattactacagtt
ctaacaatgaccactttaagcatcagtgcacgccactctttgcccaaggtgtcttatgct
actgccatggattggttcatagctgtgtgctttgcctttgtcttctctgcacttatcgag
tttgcagctgtcaactactttaccaatcttcagactcagagagcaatgaggaaggcagcc
cgggcagcagcactagcagcagcactatcagcagcaactgtaccggcagaggacgagatt
gtctcgcattctgattccaattgtaacctgaagaagcgaatgaactccacaacctctcag
atggaccagtcccctgaagccagcataatgtccaatagtgcatctcaaggtcaaccgaca
tctattcccccgccagccccaccactgccaccaccaccaccaccagcaattggaggcact
agtaaaatagaccagtattcccggatcctctttccagtggcatttgcaggattcaacctg
gtatattgggttgtttacctttcaaaagacactatggaagtgagtacaagtgtttaa
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