Trachemys scripta elegans (red-eared slider): 117882259
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Entry
117882259 CDS
T07347
Symbol
PRRX1
Name
(RefSeq) paired mesoderm homeobox protein 1 isoform X1
KO
K09329
paired mesoderm homeobox protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117882259 (PRRX1)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117882259 (PRRX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
DUF6210
Motif
Other DBs
NCBI-GeneID:
117882259
NCBI-ProteinID:
XP_034636298
LinkDB
All DBs
Position
8:complement(46281258..46373281)
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AA seq
245 aa
AA seq
DB search
MTSSYAHIMERQAVLATRLESPSNLDNLQAKKNFSVSHLLDLEEAGDMVAAQADESVGEA
GRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPD
AFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLANKNASLLKSYSGDVTAVEQPIV
PRPAPRPTDYLSWGTASPYSAMATYSATCTNASPAQGMNMANSIANLRLKAKEYSLQRNQ
VPTVN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgacttccagctatgcccacatcatggagagacaggccgtccttgccacccgcttggag
agccccagcaacctggacaacttacaggccaaaaagaacttctccgtcagtcacctgttg
gatctggaggaagccggagacatggtggcggctcaggcagacgagagcgtaggggaagcc
ggcagaagcttgctggaatccccggggctaaccagcggcagcgacaccccgcagcaggac
aatgatcagctgaactcagaagagaagaagaaaagaaagcagagaagaaacaggaccacc
ttcaacagcagtcagctccaggcattggagagagtctttgagaggacacattaccccgat
gcctttgtacgagaagacctcgcacgcagagtcaacctcactgaagccagagttcaggtg
tggtttcagaaccgaagagcaaagttccgcaggaatgagagagccatgctggccaacaag
aatgcctcccttctcaaatcctattcaggggacgtgactgcggtggagcagcccatagta
cctcgcccagctccaagacccactgactatctctcctggggaacagcctcgccttacagc
gccatggctacctattctgctacgtgtaccaatgctagccctgcccagggcatgaacatg
gccaacagcattgccaacctgagactgaaagcaaaggaatatagtttacagaggaaccaa
gtaccgacagtcaattaa
DBGET
integrated database retrieval system
