Trachemys scripta elegans (red-eared slider): 117882269
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Entry
117882269 CDS
T07347
Symbol
TMTC1
Name
(RefSeq) protein O-mannosyl-transferase TMTC1 isoform X1
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tst01003
]
117882269 (TMTC1)
Glycosyltransferases [BR:
tst01003
]
O-Glycan biosynthesis
O-linked Man type
117882269 (TMTC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_11
TPR_8
TPR_19
TPR_17
TPR_14
TPR_12
TPR_16
TMTC_DUF1736
TPR_10
TPR_7
TPR_CcmH_CycH
TPR_15
TPR_9
TPR_Slam
ANAPC3
ARM_TT21_C
TPR-S
FAT
HAT_PRP39_C
ARM_TT21_N
TPR_MalT
ARM_TT21_4th
TPR_5
ARM_TT21_5th
ChAPs
NatA_aux_su
TPR_NPHP3
ARM_TT21_2nd
HAT_Syf1_CNRKL1_C
Wzy_C_2
HAT_PRP39_N
TPR_20
DUF7017
TPR_3
Coatomer_E
Suf
Mad3_BUB1_I
Alkyl_sulf_dimr
Miga
Motif
Other DBs
NCBI-GeneID:
117882269
NCBI-ProteinID:
XP_034636311
LinkDB
All DBs
Position
1:105865784..106077595
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AA seq
960 aa
AA seq
DB search
MVTASASGRSRDRALLPPSPSPSPPPAAWAAAPARPGSGSCVAAAAALLLAGLCALCYGN
SLRGEFVHDDVWAIVNNPDVRAAAPWAGVFANDFWGKGMAENTSHKSYRPLCVLTFKLNI
LLAGMNPFYFHAVNVILHCLVTLVLMYTCDKAVFKDGRLAFVTALFFAVHPIHSEAVTGI
VGRADVLACLLFLLAFLSYNRSVDHFYVGEHFPPTASPFFLLLSLFLGTCAMLVKETGVT
VFGVCLVYDLLFLSYNRLTLRNGGVHQRFARQPAASPSASLQIPPSSRENGKHRFAHKGT
WNSCHPASPEEQRSSSLSVSNKAMWAILSYLTASNNQNFLYIARPFLKRAALVISYVILV
LYFRFWIMGGSMPMFSEQDNPASFSPYLLTRFLTYSYLLAFNSWLLLAPITLCYDWQVGS
IPLIESIWDVRNLATVLLVVVMILLSLHCITAFKKLEHREVLVGLLFLVFPFIPASNLFF
RVGFVVAERVLYMPSMGYLILFVHGLKKLCASLNRWGATALTLSALLLLLLFSWKTVKQN
EIWLSRESLFSSGVQTLPHNAKVHYNYANFLKDQGRNSEAIYHYKTALKLYPRHASALNN
LGTLTKDLVEAKEYYRRALQLNPQHNRALFNLGNLLKSQGKKEEAVFLLRDSIKYGPEFA
DAYSSLASLLAEQEQFKEAQEVYQAGIENCPESSDLHNNYGVFLVDTGAPERAVSHYQQA
IWLSPNHYVAMVNLGRLYRSLGQNKEAEAWYKRALKVSRKAEILSPLGALYYNTGRYEEA
LQVYREAAALQPSNKEIRLALAQVLAMMGQTKEAEKMTNHIVTEEAECLECYRLLSAIYS
KQERYSKALEAIDKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESYKVAVELNPDQ
AQAWMNMGGIEHIKGDYINARSYYKKALQLVPNSKLLKENLAKLDRLEKRLQEVQEKDQT
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggtgacagcctccgccagcggcaggagccgggaccgagcgctgctgccgccgtccccg
tcgccttctcctccccccgcagcctgggctgctgctccagcccggcccggctccggcagc
tgcgtggcggcggccgcggcgctgctgctggccgggctgtgcgccctgtgctacggcaac
tctctgcggggcgagttcgtgcacgacgacgtgtgggcgatcgtgaacaacccggacgtg
cgggcggcggccccctgggcgggcgtcttcgccaacgacttctggggcaagggcatggcc
gagaacaccagccacaagtcctaccgccccctctgcgtcctcaccttcaagctaaacata
ttgttggctggtatgaacccattctatttccatgcagtgaatgtaattttacactgtcta
gtgactcttgtcctgatgtatacttgtgacaaagctgtattcaaggatggtcgactggct
tttgtcacggctctcttctttgctgtgcatcctattcacagtgaggctgtaacaggtatt
gtaggcagagcggatgtcttagcctgtctactgtttctgttggcttttctctcctataat
aggagtgtggatcatttttatgttggggaacatttccctcccactgcctctccattcttc
ttgctgcttagtttatttcttgggacctgtgcaatgctggtgaaggaaactggagtcact
gtgtttggtgtgtgcttggtttatgacttgcttttcctgtcctacaatagacttacactg
agaaatggaggggtgcatcagaggttcgcacggcagcctgcggcttctccatctgcttcg
ctgcagattcctccatccagcagggagaatgggaagcaccggtttgctcacaaagggacc
tggaactcatgccaccctgcatcacctgaagagcaacggagcagcagcctttctgtctca
aacaaagccatgtgggctattcttagctacctgacggcaagtaacaaccagaatttcttg
tatattgcaaggccatttttgaagagggctgctttagtaataagttatgtgattcttgtt
ttatatttccgtttctggataatgggaggttccatgccaatgttttcagaacaggacaat
ccagcttcattctcaccttacttacttacaagatttctaacttattcgtacctcctggcc
ttcaattcctggcttctgctagcaccaattactctgtgctatgactggcaggttgggagt
attcctttaattgagtcgatatgggatgtgaggaatttagctacagttctcctggtggtg
gtgatgatattactcagcttacattgcataacagcattcaagaaactggaacatagagaa
gttttagttggcttgttattcctggttttcccatttatcccagccagcaacctcttcttc
agggtggggtttgtggtggcagagcgagtcctttacatgccaagtatggggtaccttatc
ctttttgtccatggtttgaaaaagctctgtgcctcgttaaatagatggggagctactgcc
ctgaccctctctgctttgctgctgctgctgctgttctcttggaaaactgtgaaacagaat
gaaatctggttgtcaagagaatccctcttcagctcaggtgtgcagactctgccccataat
gccaaggtgcactacaactatgccaattttctgaaagaccagggtcgtaacagtgaagcc
atctatcactacaaaactgccctcaaattgtatcctcgtcatgcgagtgctctgaacaac
ctcggcacgttgaccaaagacttggtggaagcaaaggaatactatagaagagctcttcag
ttaaacccacagcataatcgagctctcttcaatcttggaaatctgctcaagtcccaaggg
aagaaagaggaagctgtgttcttattgagagattccattaaatacggtccagaatttgca
gatgcttactcaagccttgcttccctgttggctgaacaggaacaatttaaagaagcccag
gaggtttatcaggctgggatagagaattgtccagagagctctgatctgcataataactat
ggtgttttcttagttgatactggggctcctgagagagcagtgtcccactaccagcaggcc
atctggctcagcccaaaccattacgtggccatggtgaacctgggcaggctctaccgctct
ctggggcagaacaaagaggctgaagcttggtacaaacgagcgttgaaagtatcgcggaag
gcagaaattctgtccccactgggagctctctactacaacacggggcggtatgaagaagct
ttacaggtttacagggaagccgcagcactgcagccttcaaacaaggagattcgactggcc
ctggcacaggttttagcaatgatgggacaaacaaaggaagctgaaaaaatgactaaccat
attgtgacagaagaggccgagtgcctagaatgctaccgtcttttatcagcaatctacagc
aagcaggagcgttacagcaaggcccttgaagctatagataaagctctgcagctaaaacca
aaggatccaaaagtcatatcggagctcttttttactaaaggaaatcagctaagagaacag
aaccttcttgacaaggcttttgagagctataaagtggctgtggagctgaatccagatcaa
gctcaggcatggatgaacatgggagggattgagcatatcaagggagactacatcaatgca
cgtagctattacaagaaagctttacagctggttccaaacagcaagctgctgaaggagaat
ctggctaaactggatcgcttagagaaacgattgcaggaagtccaggagaaagatcagacg
tag
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integrated database retrieval system
