Trachemys scripta elegans (red-eared slider): 117882305
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Entry
117882305 CDS
T07347
Symbol
CDX1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117882305 (CDX1)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
117882305 (CDX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
117882305
NCBI-ProteinID:
XP_034636374
LinkDB
All DBs
Position
8:complement(6693120..6722557)
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AA seq
259 aa
AA seq
DB search
MMYVGYLLDKDTNMYPNPVRHPSLNLNPQNYVPAPPQYSDFASYHHVPGINSDPHHGQPA
GAWGSPYTPTKEDWHSYGPGAASSVANPGQLGFSPTDFNPIQPPGSGLLPPPINSSVAQL
SPNAQRRTPYEWMRRSVPTSSSSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKA
ELAATLGLTERQVKIWFQNRRAKERKVNKKKMQQQTQPTSTTTPTPPAVGTPGPIGGICS
STTNLVSSSPMTIKEEFMP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgtgggctatcttttggataaggacactaacatgtaccctaacccggtcagg
caccccagcctgaacctcaatccccagaactacgtgcctgcgccccctcaatattcggat
tttgccagctaccaccacgtgccagggattaacagtgacccacaccatgggcaacctgcg
ggcgcctggggctcgccatacacacccaccaaggaggactggcattcgtacgggcctgga
gccgcttcttccgtcgctaacccggggcagcttggattcagccccaccgattttaatcca
attcagcctccaggctctggactcctacctccacccatcaacagctcagtggcccagctc
tcccccaatgcgcaaaggcgcaccccctatgagtggatgaggcgcagcgttccaaccagc
agcagcagtggcaagaccagaacaaaagacaagtaccgggtggtgtatacggaccaccag
cgcctggagctggagaaggagttccactacagccgctacatcaccatccggcggaaagcg
gagctggcggcaacgctcgggctcaccgaacggcaggtgaaaatctggttccagaaccgg
agagccaaggagaggaaggtgaacaagaagaagatgcagcagcagacgcaacccacaagc
accaccactcccaccccgccggccgttggcaccccgggtcccatcggcggcatctgcagc
agcaccaccaacctggtctcctcttccccaatgactatcaaagaagaattcatgccttaa
DBGET
integrated database retrieval system
