KEGG   Trachemys scripta elegans (red-eared slider): 117882381
Entry
117882381         CDS       T07347                                 
Symbol
KDM5A
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tst01009]
    117882381 (KDM5A)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tst03036]
    117882381 (KDM5A)
Enzymes [BR:tst01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     117882381 (KDM5A)
Protein phosphatases and associated proteins [BR:tst01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117882381 (KDM5A)
Chromosome and associated proteins [BR:tst03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117882381 (KDM5A)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 PHD_5 PHD_2 PHD_4 PHD-1st_NSD zf-PHD-like
Other DBs
NCBI-GeneID: 117882381
NCBI-ProteinID: XP_034636433
LinkDB
Position
1:complement(106695278..106774323)
AA seq 1563 aa
MTRVKLDFLDQLAKFWELQGSTLKIPVVERKILDLYSLSKIVASKGGFEVVTKEKKWSKV
ASRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMAEAGEMSRNTELKKLQIFGAGPK
MVGLALGAKDKEDEVSRRRKGTKSEAFGMQMRQRKGTISVNFVDLYVCLFCGRGNNEDKL
LLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVREYTLQSFGE
MADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGR
RKMMPEEEEYALSGWNLNNMPVLEQSVLAHINADISGMKVPWLYVGMCFSSFCWHIEDHW
SYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIMNPNVLMEH
GVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRH
CVFSHEELIFKMAADPECLDVGLAAMVCKEMTLMTEEETRLRESVVQMGVLMSEEEVFEL
VPDDERQCAACRTTCFLSALTCSCNPERLVCLYHPTDLCSCPMQKKCLRYRYPLEDLPSL
LYGVKVRAQSYDTWVSRVTEALAANLNHKKDVIELRVMLEDAEDRKYPENDLFRRLRDAV
KEAETCASVAQLLLSKKQKHSRLSPDSGRTRTKLTVEELKAFVQQLFSLPCVISQARQVK
NLLDDVEEFHERAQEAMMDEIPDSSKLQLLIDMGSGLYVELPELPRLKQELQQARWLDEV
RLTLSDPQRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQARP
RQSMMALESVVNEAKNIPAYLPNVLALREALQRARDWTAKVEAIQNCSNYAYLEQLESLS
AKGRPIPVRLDALPQVESQVAAARAWRERTARTFLKKNSSYTLLQVLSPRNDIGIYGSSK
NRRKRVKELMEKDKDLDLESLSELEDGLEEARDTASVVAVFKDREQKEIEAMHALRAANL
AKMTMVDHIEEVKFCICRKTASGFMLQCELCKDWFHSSCVPLPKTSSQKKGSSWQAKEVK
FLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRARQALATDEL
SSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLTSFQQSAFNRVIGSVS
SSPRQTMDYDDEETDSDEDIRETYGYDIKDNASVKSSSSLEPNLFCDEEIPIKSEEVVTH
MWTAPSFCAEHAYSSASKSCPQGPSTPRKQPRKSPLVPRSLEPPVLELSPGAKSQLEDLM
MIGDLLEVSLDETQHIWRILQATHPPCEDRFLHIMEDDSLDEKPLKMRARDSSERKRKRK
LERVEQFFGEVKQKSKELKKLEKPKKKKLKLTLDKTKELNKLAKKLAKEEERKKKREKAA
AAKVELAKESTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCKDKVDWVQCD
GGCDEWFHQVCVGVSPEMAENEDYICMNCAKKPMQGPSSPAHAPPPPFLLSYKLPMEDLK
ETS
NT seq 4692 nt   +upstreamnt  +downstreamnt
atgaccagagtgaaactggacttcttggatcagttagcaaaattttgggaacttcaaggt
tccactttaaaaattcctgtggtggagagaaaaatcttggatctgtattctctgagcaag
attgttgccagcaaaggaggctttgaggtggtcactaaagagaagaaatggtccaaagta
gctagtcggctaggctacctgccaggaaaaggcactggatcactgctgaagtctcactat
gaacggatactgtacccctatgaactcttccagtctggggttagccttatggcagaggca
ggagagatgagtagaaatactgagctgaagaagctgcagatcttcggagctggacccaag
atggtgggactggcattgggagcaaaggataaagaagacgaggtctctcgaagacgcaaa
ggcaccaagtcagaagcatttggcatgcagatgaggcagcgcaaagggacaatttctgtc
aactttgttgatctgtatgtttgcttgttttgtggccggggaaacaatgaggacaaactg
ctactgtgtgatggatgtgatgatagctaccacactttttgcttgattccccctttgcct
gatgttcccaagggtgactggagatgcccgaaatgtgttgctgaggaatgtaacaaaccg
cgtgaggcctttggatttgagcaggctgtcagggagtacaccctccagagctttggagag
atggcagataacttcaaatctgattatttcaacatgccagtccacatggttcccactgag
ctggtggagaaggagttctggcgactggtgagcagcattgaggaggatgtcattgtggaa
tacggggctgatatctcatccaaggactttggaagtggcttccctgtgaaggatggccgt
cgaaagatgatgccagaagaggaggagtatgcactttctggttggaacctgaataacatg
ccagtgttggaacagtcagtcctcgctcatatcaatgcagatatctctggcatgaaggtg
ccctggctgtacgtagggatgtgcttctcctctttctgctggcacattgaggaccactgg
agctattccatcaattacctgcactggggagagccgaagacctggtatggagtgccctct
catgcagcagaacaactggaggaggtgatgagagagttggctcctgaactgtttgagtca
cagcctgatctcctgcatcagcttgtcaccatcatgaaccccaatgtgctgatggaacat
ggtgtgcctgtgtacaggaccaatcagtgcgctggtgagtttgttgtgacttttcctcgt
gcttatcactccggatttaaccagggctacaactttgctgaggccgtgaacttctgcact
gcagactggcttcccattggacgtcagtgtgtgaatcattaccgacggctaaggcgtcat
tgcgtcttctcccatgaggagctgatcttcaagatggctgcagatccagagtgtttggat
gtggggcttgctgccatggtctgcaaggaaatgactctcatgacagaggaggaaacacgc
ttaagggaatcagttgtgcagatgggagtgctgatgtcagaagaggaggtgtttgaactg
gttccagatgatgagcgtcagtgtgcagcctgcaggaccacgtgcttcttgtctgctctt
acttgctcttgtaatcctgagcggctcgtatgcctgtatcatccgactgacttgtgttcc
tgtcccatgcagaaaaagtgtctcaggtaccggtatccattagaggacctcccttctctt
ctgtatggagtgaaagttagagcacagtcctatgacacttgggtcagtagagttacagag
gcactggctgccaacctcaaccacaagaaagatgtgattgagttgagagtgatgttggag
gatgctgaagacaggaagtatccggagaatgatctcttccgcaggctcagagatgctgtg
aaagaggcagagacctgtgcttcggtggcacagctgcttctgagcaaaaagcaaaaacac
agcaggctgagcccagatagcgggaggactcggaccaagctgacggtggaggagctgaaa
gcatttgtccaacagctattcagccttccatgtgtcattagccaggcccgacaagtaaag
aatcttttggatgatgtggaggagtttcacgagcgtgctcaagaagctatgatggatgag
atcccagactcttccaagctgcaactgttgatagacatgggctctggcctctatgtggaa
cttccggaactgccccggctgaagcaagagctgcagcaggcacgttggctggatgaggtg
aggttgactctctcggaccctcagagggtcactctggatgtgatgaagaagctgattgac
tcaggtgtggggctggcaccacatcatgctgtagaaaaggccatggctgagctgcaggag
ctgcttacagtatccgagagatgggaagagaaggccaaggtctgcctgcaggcaagacca
cgacaaagtatgatggccctggaaagcgttgtgaatgaagcaaagaacatcccagcttac
ctgcccaatgtattggcactgagagaagccctgcaacgagctagagactggacagccaaa
gtggaggccattcagaactgtagcaactacgcctatctggagcagctggagagcttgtct
gcaaaaggccgtccgataccagtacgtcttgatgccctgccacaggtggagtcacaggtt
gcagcagcccgtgcctggagggagcgcacggcaaggactttcttgaagaagaactcaagc
tacacactgttacaggttctgagcccccggaatgatattgggatttatggaagcagcaag
aatagacggaagagggtgaaggagttaatggagaaggacaaagaccttgatctggaatcc
ctgagtgaactggaggatggtctggaggaagccagggacactgcatctgtggtggctgta
ttcaaggaccgggagcagaaggagatcgaagccatgcacgccctcagggcagctaacctg
gctaagatgaccatggtggaccatatagaggaagtcaagttctgcatctgtcgcaaaacg
gctagtgggttcatgctacagtgtgagctctgcaaagactggtttcatagcagctgtgtg
cccctccccaaaaccagttcccagaagaagggctccagttggcaggccaaagaagtcaaa
ttcctgtgtccactctgcatgcgttctcgaaggccccgacttgaaaccatcttgtctctg
ctggtatccctgcagaagctacctgtccggctgcctgagggggaggcattgcagtgcctg
actgaacgtgccatgagctggcaggaccgagcacggcaggctctggccactgatgaactg
tcctctgctttggccaagctttctgttctcagccagcgcatggtggagcaggcagccagg
gagaaaacagagaagataatcagtgcagaactacagaaagcagcagctaaccctgaccta
cagggtcacctgaccagtttccagcaatcagcttttaaccgtgtgatagggagtgtgtca
tcatccccacggcagaccatggactatgatgatgaagaaacagattctgatgaggacatc
agggagacatatggctatgatataaaggataatgccagtgtgaaatcttcaagcagcctg
gaacccaacctgttctgtgatgaggagatccccatcaaatcagaggaagtggtgacacac
atgtggacagctccttcattctgtgctgaacatgcatattcatctgcttccaaaagctgt
cctcaaggtcctagcaccccaaggaagcagccccggaaaagtcccttggtgcctcgcagt
ttggaacctccggtgctagagctgtcacctggtgccaaatctcaactagaagatctaatg
atgataggagatctactggaggtatctttggatgagacccaacatatttggcggatttta
caggccacgcatccaccctgtgaagacagattccttcacatcatggaggatgacagcctg
gatgagaaaccattgaaaatgagagcgagagattcttctgagcggaaacggaagcggaaa
ctggagagggtagagcagttctttggagaagtgaagcagaagtctaaagagctgaagaaa
ctagagaaacccaaaaagaaaaagttgaaactaaccttggacaagacaaaggagttgaat
aagttggccaagaagctggccaaagaagaggagcggaagaaaaagcgagagaaggcagct
gcagcaaaagtggagctggcaaaggagagcacagagaaaaagagagagaaaaaggtgctg
gatatcccatctaagtatgattggtcaggagctgaggagtctgatgatgagaatgctgtg
tgtgctgcacagaactgccaaaggccctgcaaggataaggtagattgggtgcagtgcgat
ggtggctgtgacgagtggtttcatcaagtttgtgttggcgtctctccagaaatggcagag
aatgaggattacatctgtatgaactgcgcaaagaaaccgatgcagggcccaagtagtcca
gctcatgcaccacctcccccgttcttactgagctacaagctaccaatggaagatctcaag
gagacaagttag

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