Trachemys scripta elegans (red-eared slider): 117882432
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Entry
117882432 CDS
T07347
Symbol
TRA2B
Name
(RefSeq) transformer-2 protein homolog beta
KO
K12897
transformer-2 protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117882432 (TRA2B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tst01009
]
117882432 (TRA2B)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117882432 (TRA2B)
Protein phosphatases and associated proteins [BR:
tst01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117882432 (TRA2B)
Spliceosome [BR:
tst03041
]
Common components
Common spliceosomal components
SR proteins
117882432 (TRA2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
117882432
NCBI-ProteinID:
XP_034636532
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All DBs
Position
9:53590430..53623963
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AA seq
290 aa
AA seq
DB search
MSDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRS
RRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPMSTRRRHVGNRANPDPNCCL
GVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERAN
GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDREYYSRSY
RGGGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacagcggggagcagaactacggcgagcgggaatcccgttctgcttccagaagc
ggaagtgcccatgggtccggcaagtctgcaaggcacactcctgcaagatctcgatccaag
gaggactccaggcgatccagatcaaaatctagatccaggtctgaatctagatctaggtca
aggaggagttctcgtagacactatacaagatcacgctctcgttcccgctctcacaggagg
tcccggagcaggtcttacagtcgggattatcgacgacgacacagtcacagccattcccct
atgtctactcgtaggcgtcatgttggaaacagggcaaatcctgacccaaactgttgtctc
ggtgtgtttggattaagtctatacaccacagaaagggacctgagagaagtgttctccaag
tatggcccaattgctgatgtttccattgtgtatgaccagcagtctcggcgttcaagagga
tttgcatttgtgtattttgaaaatgttgatgatgcaaaggaggctaaagagcgtgccaat
ggaatggaacttgatgggagaagaatccgggtagatttctccataacaaaaaggcctcac
acccctacacctggaatctatatggggagaccaacttatggcagctcccgacgaagagat
tactatgacagagggtatgacagagggtatgatgatcgtgaatattacagcagatcttat
agaggaggtggtggaggaggaggaggaggaggatggagagctgcccaagacagggatcag
atctacaggagaagatcaccatccccatactacagccgaggaggttacagatctcgctcc
agatctcgatcctattcacctcgtcgctattaa
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