Trachemys scripta elegans (red-eared slider): 117882438
Help
Entry
117882438 CDS
T07347
Symbol
PHC3
Name
(RefSeq) polyhomeotic-like protein 3 isoform X1
KO
K11458
polyhomeotic-like protein 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117882438 (PHC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117882438 (PHC3)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
117882438 (PHC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
zf-FCS_1
SAM_2
SAM_PNT
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
117882438
NCBI-ProteinID:
XP_034636546
LinkDB
All DBs
Position
9:complement(88013477..88116991)
Genome browser
AA seq
1005 aa
AA seq
DB search
MPPREGGEKMAEAELKEHCTAMENESNAMTCSACTTTITTTSSSRTQPPQISVYSGSDRH
AVQVIQQALHRPPSSAAQYLQQMYAAQQQHLMLQTAALQQQHLSSTQFQSLAAVPQASLS
GGRQCSSPTGSVTQQSSMSQTSINLSTSPTPPQLISRSQTSNTTSSSITQQTMLLGSTSP
TLSASQAQMYLRAQMLIFTPATTVAAVQSDIPVVSSSSSSSCQSAATQVQNLTLRSQKLG
VLCSSQNGPPKNSSQAQSLALCTNKTVTGTKASQPDSPDSNRKGESPTSECRSTSVTRTS
SIHQLIAPASYSAIQPHSLIKHQQIPLHSPPPKISHHQLILQQQQVQPITLQTPLNQEPP
PSQHYVPLQSHGLPPVSNSVQSQHCSPVHIHPPPLTISPTPSSSAQQSVVVSPTPAPSPS
QSPSIIIHPQALIQSQPHPLMPSALQSEQSPQQPTTSQVRPVAQQLNLPSHLTVPPSPVV
HIGPVDQTNLMSPGQQTVSPTPHQQYPTLQSMPLPIATPPQLSTSPTQIQQLPLQSVQSL
QMQPEILSQGQVLVQNTLVSEEQLPAAEALVQLPFQTLPPPQTVAVNLQVQPSVPVETPV
IYQVENMCEEEMPEESECVRMVRTPTPPTLSPPVITLGNGEELASEAPLSEQVGLPAMAS
SVSASVIKSPSDPSHASIPPPPLLLPAAATRSNITSMPNSIPSLENRPPQAIVKPQILTH
VIEGFVIQEGLEPFPVSRSSLLVEQPAKKRLLIEGQVMSVMCVESELQNNTKHAENSSDT
EIEDIITEEGLDEMENDLLKCEFCGKMGYANKFLRSKRFCSMSCAKRHNVSCTKKFGLFT
SDKNSRWNRKSDSQSLGRCARRPSGSDGASREHFLRQLPITYPSAENDLASHDDAVPAAM
TTRLRRQSERERERELRELKIRKMPENVDLLPSVQADPSMWTVDEVWAFIRSLPGCQDIA
DEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKICARINSLKES
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccgtgagggaggagagaagatggcggaagcggaactgaaagaacattgcact
gctatggagaatgaatcaaatgcaatgacgtgttctgcatgtacaactaccatcaccacc
acctcctcctctcggacacaaccaccacagatatctgtctacagtggctccgacagacat
gctgtacaggttattcagcaggccttgcatcgtccccctagctcagctgctcagtatctt
cagcagatgtatgccgcccaacagcagcatttaatgctgcagactgccgctctacaacag
cagcacttaagcagtacccagtttcagagtctggcagctgttccgcaggcaagcctgtcg
ggtggaaggcagtgttcatcccctactgggagcgtcactcagcagtcaagcatgtcacag
acctcgattaacctttccacctctcctacacctccacaattaataagccgttcgcagacc
tccaacactactagcagcagtataacccaacagacgatgttgctggggagcacttctcct
accctgagtgcaagccaggctcaaatgtacctccgagcacaaatgctgatttttactcct
gctaccactgtggctgctgtccagtctgacattcctgttgtctcatcatcttcctcctct
tcctgtcagtctgcagctactcaggttcagaacttaacattgcgcagtcagaagttgggc
gtattgtgtagttcacagaatggcccaccaaagaacagtagtcaagctcagtcattggct
ctatgtactaataaaaccgtaactggtaccaaggccagccaaccggattctccagacagc
aacagaaaaggagagagcccaacgtctgaatgtcgaagtacatctgtcacacggacatca
agtatacatcagttaatagcaccagcttcatattctgcaattcaacctcattctctaata
aaacatcagcagatacctcttcattcaccacctccaaagatttcccatcatcagctgata
ttacaacagcagcaagttcagccaatcacacttcagactcctcttaatcaggaaccacct
ccatcacaacactatgttccactccaaagccatggtcttcctccagtttccaatagtgtc
cagtcacaacattgctcacctgttcacatccatcctcctcctttaacaatatctcctact
ccatcatcgtcagcccagcagtcagtagtggtgtctcctacacctgctccctcacctagt
cagtcgccctccataataattcatccacaagcacttattcagtcgcaaccacatcctctt
atgccatcagctctacagtcggagcagagcccacagcagcccactactagtcaagtacga
ccagtagcacaacagcttaatcttccatcccatcttacagttccaccttccccagtagta
cacattggaccagtagatcagacgaacttgatgtccccaggccagcagacagtgtctcca
acaccacaccagcaatatccaaccttacagtccatgccactcccaattgcaacccctcca
cagctgtcgacatctccaacccagattcaacaactgcccttgcagtctgtgcaatcttta
caaatgcagcctgaaattctatcccagggccaggttttggtgcaaaatactttggtttct
gaggagcagcttcctgctgcagaagctttggtccagctgccatttcagactcttccgcca
ccacagactgttgcagtaaaccttcaagtacaaccatcggtacctgttgaaacccctgtg
atttaccaagtggagaacatgtgtgaggaagagatgccagaggagtctgaatgcgtccgt
atggttagaacccctaccccaccaaccttgtctccaccagtcataaccttagggaatggc
gaggagcttgcttcagaggcgccgttgtcagaacaagtgggacttcctgcaatggcatca
tcagtcagtgcctcagtaattaaatctccatcagacccttcacatgcctctattccacca
ccacctcttttgcttccagcagctgccacaaggagtaacatcacatcaatgcctaatagc
atccctagcctagaaaacagacctccacaggctatcgttaaaccacagatcttgacccat
gttattgagggctttgtgattcaggagggtttagagccatttcctgtaagtcgttcatct
ctactggttgagcaacctgcaaaaaaaaggctcctaatcgagggtcaggtcatgagtgtc
atgtgtgttgagtcagagctgcagaacaatacaaaacatgcagagaactcctcagacaca
gagatagaggacataattactgaagagggactagatgaaatggaaaatgatctcctgaag
tgtgagttttgtggaaaaatgggatatgctaataagttcctacggtcaaagcgattctgc
tccatgtcctgtgccaaaaggcacaacgttagttgcactaaaaaatttgggctgtttaca
tcagacaagaacagtcgttggaatcggaagtcagatagccaaagtcttggacgatgtgcg
cgtcgaccaagtggctctgatggggcatcacgagagcacttccttagacagcttccaatt
acttatccatctgcagaaaatgatttggcttctcatgatgatgctgtgccagctgccatg
accactcgtctgcgaagacaaagtgagagggaaagagagcgtgaacttagggaactaaaa
attaggaaaatgccagagaatgttgacttgctaccatctgtacaagctgacccatcaatg
tggacagttgatgaagtttgggccttcatacgttctttgcctggttgtcaagatattgca
gatgaatttagagcacaagagattgatggacaggcccttctcttgttgaaagaggatcac
cttatgagtgcaatgaacattaagctgggacctgcactgaaaatttgtgcacgcatcaac
tcattgaaggagtcctag
DBGET
integrated database retrieval system
