Trachemys scripta elegans (red-eared slider): 117882445
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Entry
117882445 CDS
T07347
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117882445
Ion channels [BR:
tst04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117882445
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Ank
Ank_3
YVC1_C
DUF6850
Motif
Other DBs
NCBI-GeneID:
117882445
NCBI-ProteinID:
XP_034636601
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Position
1:337394927..337418819
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AA seq
873 aa
AA seq
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MESVMHPSWREIVNKKLKFPSELLDAIQEGDLLRVQQLLQGSDGILQQQADSEDRAWREA
LNLAIRMGGGEITGTLLRYVKFDFRQIHEALLVAVDTNQPQVVKLLLDRLDQEKSIKMDI
KSFSLAFFDRSIDNARFAPGVTPLTLACEKDLYEIVDMLVQKGHAIPRPHKISCTCLECS
NGRKYDLLKFSLFRINTYKGIASRAYLSIASEDAMLTAFKLSRELQRLSCKEPEFKPEYL
SLELLSQEFAFELLGMCRNQSEVTAVLNDLGDSEEEEEELDSQAFEEGIPNLARLRLAVN
YNQKKFVAHPICQQVLSSIWCGNLSGWRGSNTLWKFFVSCSIFLTMPLLCLVYWIAPKSR
VGKMLKIPVIKFLLHSASYFWFLIFLLVESLFLEHKNHIFLGRNQTVWENSLHMVWVAGF
FWYECKEVWIEGLHSYLLDLWNCLDIVILSLYLASFTLRVLVAGRGHLHCLDAPSSPECY
YFTRAGRHEWQPEDPQFVAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMIR
FMFILMIILTAFLCGLNNTYVYYQESQRLGNFNETFQFLFWTMFGMEEYSVVDMPQYGLA
EFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTL
PVPFNVIPTPKSLFYSVRGIVRFVCCSKPKRQQDYPPIPTIANAILEDVGLGGESCRSYR
LQVVKALVQRYIDTARREFEESRRKDLGNRITELNKSVSRLHTEVKHLHHSLPAHPAPAS
PLDGASVLHRYILRVQDNFQNFSQAAGSSGPGSPAQVMVHQDGAAGNDPQPYPKALSLGP
QHAMSPGDGAGEGDQAVEPSSHPAEEANSGPSL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgtcatgcatcccagctggagggagatagtcaacaagaagctgaagttcccc
agcgagctcctcgacgccatccaggagggggacctgttgcgggtgcagcagctgctgcag
ggaagcgacgggatcctgcagcagcaggccgacagtgaggaccgtgcgtggcgggaagcc
ctcaacctggccatccgcatgggcggtggggagatcactgggaccctgctgcgctacgtc
aagttcgacttccgccagatccacgaggccctgctggtcgccgtggacaccaaccagccc
caggtggtgaagctgctgctggacaggctggaccaggaaaagagcatcaagatggacatc
aagtccttctccttggccttcttcgaccgctccattgataacgcccgcttcgcccccggc
gtgacgccgctcaccctggcctgcgagaaggacctctacgagatcgtagacatgctggtg
cagaaaggccacgccatcccccggccccacaagatctcctgcacctgcctggagtgcagc
aacggccgcaagtacgacctgctcaagttttccctcttccgcatcaacacctacaagggc
atcgccagccgggcctacctctccatcgccagtgaggatgccatgctgaccgccttcaag
ctcagccgggagctgcagcgcctctcctgcaaggagccggagttcaagccagagtacctt
agtctggagctcctgagtcaggagtttgcctttgagctgctggggatgtgccgtaaccag
agcgaggtgacagccgtgctgaatgacctgggggacagcgaggaggaggaggaggagctg
gatagccaggccttcgaggagggcatccccaacctcgcccggctccggctggccgtcaac
tacaaccagaagaagtttgttgcccatcccatctgccaacaagtgctctcgtccatctgg
tgcgggaacctgtcgggctggcgcgggagcaacacgctctggaagttctttgtctcctgt
tccatcttcctgaccatgcccctcctgtgcctggtgtactggattgccccgaagtcacgg
gttggcaaaatgctgaagatcccagtgatcaagtttctcctccattcagcctcgtatttc
tggtttctgatctttctgctggtggagtccttgttcctggagcacaagaatcacatcttc
ttgggacgcaatcagaccgtgtgggagaactccctgcacatggtctgggtggccggcttc
ttctggtacgagtgcaaggaggtgtggatcgaggggctgcatagctacctcctggatttg
tggaactgcctggacatcgtcatcctcagcctgtacctggcctcgttcacactgcgggta
ctggtcgccgggaggggccacctgcactgcctggacgccccttcctcgccggagtgctac
tacttcaccagagccggacggcacgagtggcagcccgaagacccccagttcgtcgctgag
gtgctgtttgcggtgaccagcatgctgagcttcacccgcctggcctacatcctccccgcc
catgagtccctgggcaccctgcagatctccatcgggaagatgatcgacgacatgatccgg
ttcatgttcatcctcatgatcattctcaccgcgttcctgtgcggactcaacaacacctac
gtttactaccaggagtcccagcgactggggaacttcaacgagacattccagttcctgttc
tggaccatgttcgggatggaggagtacagtgtggtggacatgccccagtacggcctggcg
gagttcgtggggcgggcgctctacgggatcttcaccatcgttatggtcatcgtccttctc
aacatgctcatcgccatgatcaccaactccttccagaaaattgaggacgatgcggacgtg
gagtggaagttcgcccgctccaaactctacctgtcctacttcagggagggcctgacgctg
cctgtgccgtttaacgtcattcccacaccgaagtccctcttctactcagtcaggggcatc
gtcaggttcgtttgctgctccaaacccaagaggcaacaggattaccccccaattccaacc
atcgctaacgccatcctggaggacgttggcctgggcggggagagctgccgttcctatcgg
ctgcaggtcgtcaaggctctggtgcagcgctacatcgacacggccaggcgggagtttgag
gagagcaggaggaaagacctggggaaccgtatcaccgagctgaacaagtcagtgtcgcgc
ctgcacacggaggtgaagcatctgcatcacagcctgcccgcccaccctgctcccgccagc
cctctggatggggccagtgtgctgcacagatacatcctgcgggtccaggacaacttccag
aacttcagccaggccgcgggcagctccgggccgggctcccctgcccaggtgatggtgcat
caggatggggctgccgggaacgacccccagccctaccccaaggcgctctcccttggcccc
cagcacgcgatgtctcctggggacggcgccggggaaggagaccaagcagtagagccgagt
tcccatccagcagaggaagccaactccggccccagcctctag
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