Trachemys scripta elegans (red-eared slider): 117882489
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Entry
117882489 CDS
T07347
Symbol
CCDC39
Name
(RefSeq) coiled-coil domain-containing protein 39
KO
K23729
coiled-coil domain-containing protein 39
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117882489 (CCDC39)
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117882489 (CCDC39)
Cilium and associated proteins [BR:
tst03037
]
Motile cilia and associated proteins
96 nano-molecular ruler
117882489 (CCDC39)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Other domain-containing proteins
Others
117882489 (CCDC39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4201
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
117882489
NCBI-ProteinID:
XP_034636667
LinkDB
All DBs
Position
9:complement(93795941..93827133)
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AA seq
956 aa
AA seq
DB search
MSRGDTDSGSSASVLAELDWDDGFAVPVANAENKALEEELQKLQKEKANLKNQLTDFEER
IEAMTSHLKNVRQEFNFTQSLYRARENEIETEEHFKALAERELGRLKKEIQRLENEMVSL
REKKNSQENSIFKATQKLEALRCQMNWDQQALEAWLEESAHKDNDAVTIQKYAQQDDGKL
RVLTQQVEKMTMEANQKRKILDNELTETISAQIELDKAAEDFRRVHHERQELIRQWESTI
EQMQKRDQEIDHCALLLAQVRQEIRKKEDVIKEKIRFLANETGNNVEYEKRISVADRQAA
KLRLDYQNQNAYRVQLQDELDTLKATVDRTASDLESLRTEMSNLKKEIQEKHVRLSHVKD
QNVNLSNKLKFVTEKTLSLEEKAFRMEEILKEEEKIVKEKETQMNQLKELHFKKTQELQI
QREKEKSIIAEIEGTRASLKNLNSRLRILDADTLKQQEIMYNQDFYIQQVERRLSRLKGD
VNTDERQVLEAKVVELTKTLEEKKDAYNLLHAQHKKLQSDVHFIKRAMDKTGEEMTGLMI
RIDELNLFNDKSDKELKKAKALKQDLMIEDNLLKLELKRLRDTLYNKAEQVLSLEKRKLQ
LNTAMEERTEEIKVHKAMIESQIRFVEQERQSVSAEFQDRLSKIEKLRCRYEILTIVMMP
PEGEEEKTQTYYVIKAAQEKEDLQREGDDLDAKIRKAEKEVIALQNTMHVLNNCNSNYRN
SFKTVTETSEEYKEKLQLEEEKRAADEKYRYKRRQIKELQEDLQSMENTLDIMIKEEAVY
QEKTNQKQAQVLQLNKEIDQQKPKLERVMTQCSRLSKEVRSLKKSKTKTQEEEDIDLREL
KDYSRTIDKLLVDVLEANPDLTLPFQTYFQQSCLELPTAASIGSHYSSRSSSSQSSVASV
RSTRSTMGSASGQAPPLKIIDLSLSFSSPAATASAGSRPASAASSSSSLQSRKSLK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtggcgacaccgacagcggctcctccgcctcggtcctggccgagctggactgg
gacgatgggttcgccgtccccgtggccaacgcggagaacaaggcgctggaagaggaactg
caaaagttgcagaaagaaaaggcaaacctaaaaaatcagttgactgactttgaagagcgt
attgaggcaatgacatcacatttgaaaaacgtcaggcaggagttcaactttacacagtct
ctttacagagccagagagaatgaaattgaaaccgaagagcactttaaagcccttgctgag
agagagcttggacgactcaaaaaagagattcaacggctggaaaatgagatggtttcctta
agagaaaagaaaaatagtcaagaaaatagtatattcaaagccactcagaagctggaagcc
ttaagatgccagatgaactgggatcagcaagctctggaggcctggttagaggaatcagct
cataaagacaatgatgcagtcacaatccagaagtatgctcaacaggatgatgggaaatta
agagtgctgacccaacaggtagaaaagatgactatggaagctaatcagaaacgcaaaatt
cttgacaatgagcttacagaaaccataagtgctcagatagagttggataaggcagctgaa
gattttcgcagggttcaccatgaaaggcaagagctcatcagacagtgggaaagtacaata
gagcagatgcagaaaagagatcaagaaatagatcactgtgctttgttattagcccaggta
agacaggagatccgaaagaaagaagatgtgattaaagagaagattcgctttttggcaaac
gagaccgggaacaacgtggagtatgaaaagagaatttctgttgctgaccggcaagctgcc
aaactcagattagattaccaaaaccaaaatgcttatagagttcaactccaggatgagctg
gatactttaaaagccactgtggacagaactgcttctgatttagaatctctgagaacagaa
atgtccaatctgaagaaagaaatccaggaaaaacatgtcaggctaagccatgttaaagac
cagaatgtgaatctttcaaataaactgaagtttgtgactgagaagacattgagtttagaa
gaaaaagctttcaggatggaagaaatactaaaagaagaggagaaaattgttaaagaaaaa
gaaacacaaatgaaccagttgaaagaactccatttcaagaaaactcaggagttacagata
cagagggagaaggagaaatctattattgcagaaatcgagggaacccgagcatcacttaaa
aaccttaacagtcgtttacgcatacttgatgcggacaccttaaagcaacaggaaatcatg
tataatcaggatttttatattcagcaagtggaacgacgactgtcacggttaaaaggggat
gttaatacagatgaaaggcaagttctggaagctaaagttgtcgaacttacaaagacctta
gaagaaaagaaagatgcatataatcttttacatgcccagcacaagaaacttcagagcgat
gtccattttatcaagagagcgatggataagacaggagaagaaatgacaggtctgatgatc
agaatagatgaactaaaccttttcaatgacaaatcagataaagagttaaaaaaagccaaa
gctcttaagcaggatttgatgattgaagataatctcttaaaattggaattgaaacgtctt
cgagatacgttgtacaacaaggcagagcaagttctctcactggaaaaacgaaagctacag
ttaaatacagctatggaagaaagaactgaagaaattaaggttcacaaggcaatgattgaa
tcacaaataagatttgtggagcaggaacggcaaagtgtaagtgctgaatttcaagaccgt
ctaagtaaaattgaaaaactaagatgcagatatgaaattcttaccattgtcatgatgcct
cctgaaggagaagaggagaaaactcagacgtactatgtcattaaggctgcccaggagaag
gaggaccttcagcgtgaaggtgatgacttggatgcaaagatccgcaaagctgaaaaagaa
gtcatagccctgcaaaataccatgcatgtgcttaataactgcaacagcaattaccggaac
tcttttaaaacagtgacagagacaagtgaggagtacaaagaaaagctgcaattagaagaa
gagaaaagagctgctgatgaaaaatacagatacaagcgaagacagatcaaggagcttcaa
gaagaccttcagagtatggaaaacactttagacatcatgataaaagaggaggctgtctac
caagaaaaaacaaatcagaagcaagctcaggttttgcagctgaacaaagaaatagatcaa
cagaagccaaagttagaaagagtcatgacacagtgttccagactatctaaagaagttcga
tcattaaagaaaagtaaaacgaaaacgcaggaggaagaagacattgacctccgtgagctg
aaagactacagcagaaccattgacaaattgttggttgatgtcttagaagcaaaccctgat
ttaactctaccctttcaaacatactttcaacagtcctgtttagaacttcctacagctgct
tccataggtagtcattacagttctagatcatcttcttcacaaagctcagtggcctctgtc
agatcaaccaggagcaccatgggttcagcttctggccaagcacccccacttaaaattata
gatctgagtttatcgttcagttcgccagcagcaacagcaagtgctggttcacggcctgcc
agtgcagctagcagctccagtagccttcagagcagaaagagcctgaaataa
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