Trachemys scripta elegans (red-eared slider): 117882495
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Entry
117882495 CDS
T07347
Symbol
GPC4
Name
(RefSeq) glypican-4
KO
K08110
glypican 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117882495 (GPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tst00535
]
117882495 (GPC4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
117882495 (GPC4)
Proteoglycans [BR:
tst00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
117882495 (GPC4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
Others
117882495 (GPC4)
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Motif
Pfam:
Glypican
DUF5856
tRNA-synt_1g
Motif
Other DBs
NCBI-GeneID:
117882495
NCBI-ProteinID:
XP_034636675
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Position
9:complement(3879832..3992873)
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AA seq
562 aa
AA seq
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MPRRSACPPPLLCTLAACSLPLLLLAAELKSKNCSEVRRLYVAKGFSQGDAPSHEIHGDH
LKVCPQGYTCCSQEMEEKYSQQSKHDFRNAVVEFSNHLQTTFSSRYKKFDEFFKELLENA
EKSLNDMFLRTYGRLYMQNSELFKDLFIELKRYYVGGNVNLEEMLNEFWARLLERMFRLV
NPQYHFTDEYLECVSKYTEQLKPFGDVPRKLKLQVTRAFVAARTFAQGLAVARDVVTKVS
VVNPTPQGERALLKMMYCPYCRGLVTVRPCYNYCFNVMRGCLANQGDLDTEWNNFIDSML
MVAERLEGPFNIESVMDPIDVKISDAIMNMQENSVQVSQKVFQGCGQPKTLTQGRASRSV
SESGFSARFRPYNPEERPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPGNICNDEKMAAG
RVVEDECWNGSAKSRYVFAVTGNGLANQVNNPEVEVDITKPDMVIRQQIMALRVMTNKMK
NAYNGNDVDFLDISDESSGEGSGSGCEFQQCPSEFEFNGTNVTGKTNKIDKNTNTSAAAS
IGLSQATLFFSILFLAMQRQWR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgccccggcggagcgcctgcccgcccccgctcctgtgcactttagccgcctgcagcctc
ccgctgctgctgctggccgccgagctcaagtccaaaaactgctccgaagtccggcggctc
tacgtcgccaagggcttcagccagggcgatgcgcccagccacgagatccacggtgaccat
ttgaaagtatgtccacaaggttacacgtgttgttctcaagaaatggaagagaagtacagt
cagcagagtaaacacgacttcagaaatgctgtagtggaatttagcaatcacctacagaca
acgtttagttcccgttacaaaaagtttgatgaattcttcaaagaactgcttgaaaatgcc
gagaaatccttgaatgacatgtttttgcggacgtatggtcgtttatacatgcagaactct
gaactttttaaggatctcttcatagagctgaagcgctactatgtagggggaaatgtaaac
ctggaagagatgctcaatgagttctgggcgcgtctcctggaacgtatgtttcgattagtg
aacccacagtaccatttcaccgacgaatacctcgaatgcgtgagcaagtacacagagcag
ttgaagccatttggagacgtaccgcggaaactaaaactacaagtgacacgagcatttgtg
gctgcccgcacttttgcacaaggcctggcagtggcaagagatgtcgttaccaaagtgtct
gtggtaaacccaacacctcagggtgagcgagcgctgctgaagatgatgtactgtccatat
tgtcgaggcctagttactgtgaggccgtgttacaactattgctttaatgtcatgagaggc
tgtttagccaatcaaggggatctggacacagagtggaataactttatagattctatgttg
atggtggctgagaggctagagggtccttttaatattgagtcagtcatggacccaatcgat
gtgaaaatttcggatgcaatcatgaacatgcaggagaacagcgtgcaagtgtctcaaaag
gttttccaaggatgcggacagcctaaaacgctgacgcagggccgggcctctcgctcagtc
tctgaaagtggcttcagtgctcgctttagaccctacaacccggaggagcggccaactaca
gctgctggcacaagtttggatagactggttactgatgtgaaggaaaaactgaagcaagcc
aaaaagttttggtcctctctccctggcaacatctgtaatgatgagaagatggctgctggg
cgtgtcgttgaggatgagtgttggaatggaagtgccaagagcaggtacgtctttgcagtg
accggaaatggtttagccaatcaggtgaataatcctgaggtagaagttgacattacaaaa
ccagatatggtgattcgtcagcaaatcatggcccttcgggtgatgaccaataaaatgaag
aatgcttacaatggaaatgatgttgacttccttgatataagtgatgaaagcagcggggaa
ggaagtggaagtggctgtgaatttcagcaatgtccttccgagtttgagttcaatggaacc
aacgttactgggaaaactaacaagattgataaaaacacaaacacttctgcagctgccagt
attggtctatcccaagcaactttgttctttagcatcttattcttggccatgcaaagacaa
tggagataa
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