Trachemys scripta elegans (red-eared slider): 117882541
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Entry
117882541 CDS
T07347
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117882541 (RLIM)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117882541 (RLIM)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117882541 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
117882541
NCBI-ProteinID:
XP_034636814
LinkDB
All DBs
Position
9:20651700..20666185
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AA seq
597 aa
AA seq
DB search
MESSDSNDKGSIDHSEAQRRSQLDRLEREEAFYHFVNNLNEEDYRLMRDNNLLGTPGEIT
EEELMRRLHQVKEGPPQQNGDENRGAESTEDVSNRDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNPNPEAENEQSVEPSNGEDLENSQSDTETPRS
ESPSVRQPGSDRSTSEELATEEASPLRGQRRARSRSPEQRRTRARTDRSRSPINPASETP
RRSPHNMPSQTLDHSLVNESEGSSRTRQHVTLRQHTTGTEITSENAVLFSTPETRPAPPA
LGSSETNGSSESAAPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGLRRTFSRSERAGVRTYVSTIRIPIRRIINTGFNETTSVAIQTILRQIMTGFGELN
YYMYSDGDADPNGPAPNQNVDAPELQNGGDSGSTSSRNESTEGSSGEVYENSNEGGSTSA
RREGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAWRNFGESDAL
KTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcagattctaacgataaaggaagtattgatcactcagaagcacagcgccgg
agtcagctggatcgattagaacgtgaagaagctttctatcactttgtcaataacctgaat
gaagaggactataggcttatgagggataacaatttgctaggaacaccaggtgaaattact
gaagaagaattgatgagaaggctacatcaagttaaagaaggtccaccacagcaaaatggt
gatgagaacagaggtgcagaatccacagaagatgtttctaatagagattccataatagac
tggcttaattcagtacgacagactggaaataccacacggagcgggcaaagaggaaaccag
tcttggagggcagtgagccggactaaccctaacagtggtgatttcagattcagtttggaa
ataaatgtcaaccgtaataatgggaacccaaacccagaagctgaaaatgagcaatctgta
gagccctctaatggtgaggatttggaaaatagccaaagtgacactgagactccaagatct
gaatcgccatctgtaaggcagcctggctcagacagaagtacctctgaggagttagcaact
gaggaagcatctcctctcagaggccagagaagagcaagaagcaggagcccagaacaacga
agaacccgggctaggactgatagaagtaggtcacctattaatccagcaagtgagactcct
cgcaggtctcctcataatatgccatctcagacacttgatcattccctcgtaaacgaatct
gagggaagttctagaactagacagcatgtgacgttaaggcaacatacgacggggactgag
attacaagtgaaaatgcagttctgttttcaacccctgaaacaagacctgctcctccagca
ttaggttcttcagaaacaaatggcagcagtgagtctgcagctcctggacagagaccacct
actatagttcttgatcttcaagtgagaagagtccgtccaggagaatatcggcagagagac
agcatagccaaccgaacccgatccaggtcccagacaccaaacaatacagtcacttatgaa
agtgaacgtggagggcttaggcgtacattttcacgttcagaacgggctggagtgagaact
tatgtcagtaccattaggattcctattcgtagaatcataaacacgggctttaatgagaca
acatcggttgcaattcagaccattctaaggcagataatgacaggttttggagaattaaac
tattatatgtacagtgatggtgatgcagatcctaatggcccagccccaaaccaaaatgta
gatgctcctgagctacagaatggaggtgatagtggtagtactagttcacgcaatgaaagt
actgaaggtagctcaggggaggtatatgaaaatagtaatgaaggaggttcaacatctgct
aggcgggaaggtcggaatactaggggatcagtcacttttgaagaaagtggctctttacca
ttccttagcctagcacagttttttctactaaatgaggatgatgatgaccagccaagagga
ctcaccaaagaacaaattgacaacctagcatggaggaattttggtgaaagcgatgctctg
aaaacctgtagtgtctgtattacagaatacacagagggcaacaagcttcgtaaactgcct
tgttcccatgagtaccatgtccactgcattgatcgctggttatcagaaaattccacttgt
cctatttgtcgtagagcagtcttagcgtctggtaacagagaaagtgttgtctaa
DBGET
integrated database retrieval system
