Trachemys scripta elegans (red-eared slider): 117882547
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Entry
117882547 CDS
T07347
Symbol
NLGN1
Name
(RefSeq) neuroligin-1 isoform X1
KO
K07378
neuroligin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117882547 (NLGN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117882547 (NLGN1)
Membrane trafficking [BR:
tst04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117882547 (NLGN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
117882547
NCBI-ProteinID:
XP_034636828
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All DBs
Position
9:90013262..90591448
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AA seq
863 aa
AA seq
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MALPRSVWLNCVWRAMMVRLLHMGLDATFVLCILGFLLHAAAVSSQKLDDIDPLVTTNFG
KIRGIKKELNNEILGPVIQFLGVPYAAPPVGEHRFQPPEPPSPWSDIKNATQFAPVCPQN
IIEGRLPEVMLPVWFTNNLDVVSTYVQDQNEDCLYLNIYVPTEDVKRISKECARKPGKKI
CRKGGPLTKKQTDDLGDNDGAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASY
GNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGS
GAGGSCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQPAKYARMLATKV
GCNMSDTVELVECLQKKPYRELVDQDIQPARYHIAFGPVIDGDVIPDDPQILMEQGEFLN
YDIMLGVNQGEGLKFVENIVDSEDGISASDFDFAVSNFVDNLYGYPEGKDILRETIKFMY
TDWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSNFGSPTYFYAFYHHCQTDQVPAW
ADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDT
KFIHTKPNRFEEVAWTRYSQKDQLYLHIGLKPRVKEHYRANKVNLWLELVPHLHNLNDIS
QYTSTTTKVPSTDITFRPTRKNSVPVTSAFPTAKQDDPKQQPSPFSVDQRDYSTELSVTI
AVGASLLFLNILAFAALYYKKDKRRHDVHRRCSPQRTTTNDLAHAQEEEIMSLQMKHTDL
DHECESIHPHEVVLRTACPPDYTLAMRRSPDDIPLMTPNTITMIPNTIPGIQPLHTFNTF
TGGQNNTLPHPHPHPHSHSTTRV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcccttccaagatccgtgtggctgaactgcgtatggagagcaatgatggtccgtcta
ttacacatgggattggatgccacttttgttctttgtatacttggatttttgcttcatgct
gcagctgtgtcctcacaaaaattggatgatattgacccactcgtgaccaccaactttggc
aagataagagggattaagaaggaacttaataatgaaattttggggcctgttattcagttt
cttggggttccttatgctgccccaccagtaggagagcatcgctttcaacctcctgaacct
ccatctccctggtcagatatcaaaaatgctactcaatttgctccagtgtgtccacagaac
attatagaaggcagattgcctgaagtcatgcttcctgtgtggtttactaataacttggat
gtagtttctacctatgtacaagatcagaatgaagactgcctctatttaaatatatatgtc
ccaactgaggatgtcaaaagaatatccaaggaatgtgccagaaaacccggcaagaaaatt
tgtagaaaaggaggtccccttacaaagaaacagacagatgatttaggtgataatgacggt
gctgaagatgaagacattcgggacagtgggggacctaagccagtgatggtgtatattcat
ggagggtcctacatggaaggcactggaaatttatatgatggcagtgttctggcaagttat
ggcaatgtgatagtcatcacagtcaactatcgccttggggtacttggtttcttgagtact
ggggatcaagcagcaaaaggaaactatggcctccttgatctaatccaggctttgcgatgg
actagtgaaaatattgggttctttggtggtgacccattaagaataactgtttttggatcc
ggtgcaggcggttcatgcgtcaatctgttgactttatcccattattctgaaggtaaccgt
tggagcaattcaaccaaaggactttttcaaagagcaatagctcaaagtggaacagctctc
tccagctgggcagttagtttccaacctgcaaaatatgccaggatgttggctacaaaagtt
ggttgcaacatgtcagacactgtagaattggtagagtgtctacagaagaagccttataga
gaacttgtggaccaggacattcaaccagcacgataccacatagcctttggaccagtaatt
gatggtgatgtgataccagatgatcctcagatattgatggaacaaggagaattcctcaac
tatgacataatgttgggagttaaccaaggagaaggtttaaaatttgttgaaaatatagtt
gatagcgaagatggcatatcagctagtgattttgactttgctgtttccaattttgtcgat
aacttatatggataccctgaaggcaaagatatattgagagaaactattaaatttatgtat
actgactgggcagaccgacacaatccagagacaagaaggaaaacactgctagctttgttt
actgatcaccagtgggttgcaccagcagtggctacagcagatcttcactcgaattttgga
tcgcctacatacttctatgccttctaccatcattgccaaacagatcaggtacctgcttgg
gcagatgcagcccatggagatgaggttccttatgtactgggaatccctatgattggtcct
actgaattatttccctgtaatttctccaaaaatgatgtcatgctaagcgcagtggtgatg
acatattggacaaactttgcaaaaactggtgacccaaatcaaccagtcccacaagataca
aaattcattcatactaaacccaatcgttttgaggaagtagcatggaccagatattctcaa
aaagaccaactgtatcttcacattggattaaaaccacgagtgaaggaacattacagggcc
aataaagtgaacctgtggctggaactggtacctcatctgcacaatcttaacgacatttca
cagtatacctcgaccacaactaaagtgccatcaactgatattactttcagaccaacaagg
aaaaattctgtacctgttacttcagcctttcctacagccaaacaagatgatcccaaacaa
caaccaagtccattttcagtggatcaaagggactattccacagagttgagtgttactatt
gcagtcggagcatctttgctattcctaaacattctggcctttgcagcattgtactacaaa
aaggacaagaggagacatgatgttcataggagatgtagcccacagcgtactactaccaat
gatcttgcccatgcacaagaagaggagataatgtccctccaaatgaagcacactgacttg
gatcatgaatgtgagtccatccatccacatgaggtggttcttcggaccgcctgtccccca
gactacacactagctatgagaaggtctcctgatgatattcccttaatgacacccaacacc
attacaatgattcccaacactataccagggattcagcccctacacacattcaataccttt
actggaggacagaataatactctgccccacccccatccccacccccattcacattcaaca
accagggtatag
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