Trachemys scripta elegans (red-eared slider): 117882571
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Entry
117882571 CDS
T07347
Symbol
FMR1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117882571 (FMR1)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117882571 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
117882571 (FMR1)
mRNA cycle factors
Stress granule specific factors
117882571 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXMR_C2
KH_9
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
117882571
NCBI-ProteinID:
XP_034636902
LinkDB
All DBs
Position
9:9576922..9625468
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AA seq
586 aa
AA seq
DB search
MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPERQIPFHDVRFPPPAGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLEVPEDLRQMCAKESAHKDFKKAVGAFSVIYDSENYQLIILSINEVTTKR
ANMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSYLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENDKNIPQEEVLVVSSTVTGETQKPEIKSRQGMVPFVFVG
TKDSITNATVLLDYHLNYLKEVDQLRLERLQIDEQLRQIGATSRPPPNRTDKEKGYMTDD
GPGLGRGSRPYRNRGHSRRGPGYASGTNSEASNASETESDHRDELSDWSLAPAEEERDNY
LRRGDGRRRGGGARGQGGRGRGGFKGNDEQSRTDNRQRNSRDSKGRTADGSLQIRIDCNN
ERSVHAKTLQNTSNEGSRLRTGKDRNQKKEKSDSVDGQQPLVNGVP
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaggtgcggggctccaatggggccttctacaaggcatttgta
aaggatgtacatgaagattcaataacagttgcatttgaaaacaactggcagccagagaga
caaattccattccatgatgtgaggtttccaccacctgcaggctataataaagacataaat
gaaagtgatgaagtagaggtttattccagagcaaatgaaaaagaaccatgttgctggtgg
ctggctaaagtgagaatgataaagggtgagttttatgtaatagaatatgcagcctgtgat
gctacatacaatgaaattgtcacaattgagcgtttaagatctgtgaatcccaacaaacct
gcaacaaaagatacttttcacaagatcaaactggaagtgccagaagatttaaggcaaatg
tgtgccaaagagtctgcacataaagacttcaaaaaggcagttggagcattttctgtaata
tatgattctgaaaactatcagcttatcattttgtccatcaatgaagtaacaacaaagcga
gcaaatatgctgattgatatgcactttcgaagtcttcgcaccaagttatctctgatattg
aggaatgaagaagctagtaaacagctagagagctcaaggcagcttgcatcacgatttcat
gaacagtttgtggtacgtgaagacctaatgggtctggccattggcactcatggtgctaat
attcaacaagccagaaaagtacctggtgtgactgctattgatcttgatgaagacacctgc
acattccatatttatggagaggatcaagatgcagtgaaaaaggcaagaagctaccttgaa
tttgctgaagatgttatacaagtcccaagaaacttagtaggaaaagtaataggaaaaaat
ggaaaactgattcaggagatagtggacaaatcgggtgttgtgagagtgagaattgaagct
gaaaacgataaaaatattccacaagaagaggtgttagttgtgtcatcaactgtaacaggg
gaaacacagaaacctgagatcaaatctaggcagggaatggtaccatttgtatttgtggga
accaaggacagcatcactaacgcaactgtgcttttagattatcaccttaattatttaaag
gaggtagaccaactgcgtttggaaagattgcaaatcgatgaacagctccgacagattgga
gctacttctagaccaccaccaaatcgtactgacaaggaaaaaggatacatgactgatgat
ggtccaggacttgggcgaggtagtcgaccctacagaaacagagggcacagcagacgtggt
ccaggctatgcttcaggaactaattctgaagcatcaaatgcttctgaaacagaatctgat
cacagagatgagcttagtgattggtcgttagctccagcagaagaagaacgagacaattac
cttcgcagaggagatggacgaagacgtggaggtggtgcacgaggccaaggtgggcggggt
cgtggaggtttcaaaggaaatgatgaacagtcacgaacagataaccgtcaacgtaattca
agagattctaaagggagaacagcagatggatcacttcagatcagaattgactgcaataat
gaaaggagcgtccacgctaaaacattacagaatacctccaatgaaggtagtcgactgcgc
acgggtaaagatcgtaatcagaagaaagagaaatcagacagtgtggatggtcagcaacca
ttggtgaatggagtaccctaa
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integrated database retrieval system
