Trachemys scripta elegans (red-eared slider): 117882592
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Entry
117882592 CDS
T07347
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC117882592
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117882592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117882592
Membrane trafficking [BR:
tst04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117882592
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
117882592
NCBI-ProteinID:
XP_034636974
LinkDB
All DBs
Position
9:complement(58556268..58909277)
Genome browser
AA seq
2318 aa
AA seq
DB search
MELNRCPSASVEEDQRQGDGEDATADAGNCVVSEELDLVQMYLTCLPDTYMKAKFTLTAY
LACWLVLKLCKRACEKGDSASKKVLRGSAARGTAGVTEEETTSKKPKHHTQVLSQFQTPE
PTENYITEGEFEDDQSSSAPSTVELEIRGSSQETDEDYFETQSHQSESLSDIKTEPYESV
SDTESVASDISGETCLSSNCLSAEKKEPCHTFPDTNAEIPPHKLHCMSQLELSQKAQLEL
SSDLKVAPSKSEFCIQTTKSRREEEAGEEELILTSDPSNTGSGTSGEDTISKTETKLVVD
GLQGEAKSENNKVQSCASSEPAEDAIAKSKKSPAGLSIACLKANSESCLTFLETQQFPLQ
PDVGSSHSLPNINFETNRTDSKRNSETFEFHCALDSRSHIKCSQRNSVNNEETTATKTRN
RTPGATLKTDSLLYQPCLKSKFQLPHMRPEIKESKTWHSAPENINAGGERDYLGNCIQLT
DKLRLSCSRIHLEGLGFEYTWKNIERVGGSSEKAIKVEGKFGIKGSLLNTCLDSNNSQLS
HPAGSQQSAEANLHTESEKCGLNTEADMCADGLSSAQLQLRDTSEWDSKERETPSPLASE
PMSVNAEGEVRKAKCKSERGFKAHGFSHSINSESGISEDQATCLVGVSAIAENKGDNYLA
NYGPAGKTQLNNLEESSPESPSTEACVGERDSEDSSELNLGWKSLEATLNSGGQDIAGEQ
DVSMLQNLNCKNNALLGHSELVTTNGHLADAGKKDENDGVDACSVEIATKPHYMHQGKKL
MKLSELKPALIIISVEEKGLQSKMLNDDRPAGIITGTLGELANEDLGSHPVARKEPDESQ
RDLNAYSSLEEQTLPIQPISGNEEVTAAGSTGQEESEIVQQQVERTDPDLSLKLRCSGFP
VTTIKNESSGSNLHLEDVTVPSKEKADACIGAHLKSPGIIIGGICQVESCRTNAGVQSET
ELLKKSLFETRDSKVTEENEFNISQGLEQDICGTSATALEKNRISGLCQGDGAYGDTFGS
IISCVQRLEKKETESCNISKEQIGISEDSPSRELKLGSTVEELASLSKDNERNPNETDAF
NCIVKTESQEASALGLDNVSTSSANSEEMDENSFHFLGSNSSLYKAVQKQTKTGKPSKFL
VFSKIASFKKTKTAAAENQGSSSFFGSKTKTEEFDAGKEDEDTESLQSFKSSSPSSAFQR
KESYTSEYSDDDDLFYERPAGLFSRISLRKASGSGRILMDNIDTNSTSPSLNVKHSEARV
LESVENNDSEVPQYSLVRKSLSENEYKRNKNPEGKKFRTRLALAHKSFSSFFESKSLEKE
NPEQSPKGSLKHEKEKAKLRQSSWKAFLKSREADGLKNPTLASLSPSQESLKTTRGHQQG
PGNVTRRTSTEKQESSNGQAFLSSYEFNATSTDANYSDTSVESIEVSTPIDMRRKRVLSY
DLTIKCPEYPDYAEQRETMVNSSDTSEEYWLRSPFSPSDLQSPFTQLSPSCPQLSTYEGK
DMPCRPMSPKPQSPRPGSQRKSFRYPGRISATSMISLGNSSAIDSNLEAPERPKTLKPRG
TLLLSVHSLDNEYLREDSGISSQSQISLNTASSVSDILRDEDPQQQSQTPPEKRPSEKWV
LHRKKKSPQIMLSPRPFSSIESKVWMLPFLIPDGKAKKTSQRKRLKPLYKRFSCDDMWLE
RYRKRNLEKETQLEREIQLRNLPEDQLKARMSLSITSPVAFEILPLKLHPFSQSTPTGLD
CVGWRRRISFPVITDGALDKTALADDVGSEEDLYEDFRSSNHRYGHPGGGGEQLAINELI
SDGSVVYAEALWDHVTMDDQELGFKAGDVIEVMDATNKEWWWGRILDSEGWFPASFVRLR
VNQDEPMEDYPMKAEDGKEEDASTTARRYGVGQTSKDQMRTNVINEIISTERDYIKHLKD
ICEGYIKQCRKRADMFTEEQLKTIFGNIEDIYKCQKKFVKALEKKFNKDHPHLSEVGSCF
LEYQTEFQIYSEYCNNHPNACVELSRLTKVNKYVYFFEACRLLQKMIDISLDGFLLTPVQ
KICKYPLQLAELLKYTNPQHRDFKDVEAALNAMKNVARLINERKRRLENIDKIAQWQSSI
EDWEGEDVLVRSSELIYSGELTKISQPQAKSQQRMFFLFDHQLVCCKKDLLRRDILYYKS
RINMDDMEIVDVEDGKDKDFNISVKNAFKLLCRDPEEVHLFCAKKPEQKQRWLKAFENER
KQVQLDQETGFSITEVQKKQAMLNANKQHHTGKPKAVTRPYYDFLMRQKHPSLPTNLPQQ
QVFMLAEPAQALELLAEHQQADTLSEVRGSSLLCLNPY
NT seq
6957 nt
NT seq
+upstream
nt +downstream
nt
atggagttaaataggtgcccaagtgcatcagtagaagaggatcaaagacaaggggatggg
gaggatgctactgctgatgctggcaattgtgttgtcagtgaagagctggatctggtacaa
atgtatcttacctgtttaccggacacctacatgaaagctaaattcaccctgacagcatac
ctggcatgctggttagttctgaaactctgcaagagagcctgtgagaaaggagactctgct
tctaaaaaggtgctcagaggaagtgccgcaagagggactgctggagtgacagaagaggag
actacttctaagaagccaaagcaccatacccaagtgctgagtcaatttcagaccccagag
ccaactgaaaactacatcactgaaggagagtttgaagatgaccagagttcttctgcccca
agcacggtagagttggagatacgtgggtcaagccaggaaacagacgaagattattttgag
acccaatcgcatcagagtgaatccttgtctgacataaagactgagccttatgaaagtgtg
tcagacacagagtctgttgccagtgacataagtggagaaacttgcttaagttcaaactgc
ctttctgctgaaaaaaaagaaccatgccatacttttcctgataccaatgcagaaataccc
cctcataaacttcattgcatgagccaactggagttgagtcaaaaggcacaattggagttg
tcttctgatttaaaagtagcaccaagtaaaagtgaattttgtatacagactacaaaatcg
agaagagaagaagaggcaggagaggaagaactaatattaactagtgatccctccaatact
gggtctggcactagtggagaggacactatatctaagacagagactaaattggtagtggat
ggattgcaaggtgaagcaaagtctgaaaacaataaagtgcaatcctgtgccagctcagaa
ccagctgaagatgctattgcaaagagtaaaaaaagtccagcaggattaagcattgcttgt
ctgaaagcaaactctgaaagctgtttgacttttctcgagactcagcaatttcctttgcag
ccagatgtaggatcaagccatagtttgcctaatattaattttgaaacaaatagaactgac
agtaaaagaaactctgagacatttgaatttcactgtgcactagattctagatcccacata
aaatgcagtcagaggaactcagttaacaatgaggaaactacagctacaaagacaagaaac
agaactccaggggccacccttaaaacggattcactcttataccagccctgcctaaaatcc
aaatttcagcttccacacatgaggccagagatcaaagaaagtaaaacatggcacagtgca
cctgaaaatataaatgccgggggcgagagagactacttaggtaactgcattcagcttaca
gataaattaagattgtcatgttccaggatacatcttgaaggattgggttttgagtacacc
tggaaaaacatagaaagggttggtgggagctctgaaaaagcaataaaagtggaggggaaa
tttggcataaaaggatcactccttaatacctgcctagactcaaataacagtcagctatct
catccagcgggctcccagcaaagtgctgaagctaatttgcatactgaatcagagaaatgt
ggccttaacacagaagcagacatgtgtgctgatggcttatcttcagcacagctccaactg
agagatacctctgagtgggattcaaaagaaagggagactccctctcccttggcttcagag
ccaatgagcgtaaatgctgaaggagaggtaagaaaagctaaatgcaaatctgagaggggt
ttcaaagcacacgggttctctcacagcattaactctgaatctggcatcagtgaggaccaa
gcaacttgtcttgtaggtgtttctgccattgcagaaaacaaaggtgataactatttagca
aactatggcccagctggtaaaacacagctgaacaacttggaggagagcagccctgaatca
ccaagtactgaggcttgtgtgggagaaagagattcagaggattcttctgaactgaatttg
ggttggaaatccctggaggccacactgaactctggtggccaagacattgcaggagagcag
gacgtttcgatgctgcaaaacctgaattgcaaaaacaatgccttactgggtcactctgag
cttgtaacaacaaatggacatctcgctgatgcaggaaaaaaggatgagaatgatggtgtt
gatgcctgttctgttgaaatagctaccaaaccacattacatgcaccaggggaaaaagttg
atgaagctctcagagttaaaacctgctttgattataatatctgtggaggagaagggcttg
cagtccaagatgctgaacgatgaccgtcctgctggaataataactggaacgttaggagaa
ctagccaatgaggatttggggtctcatcccgttgccagaaaagaacccgatgaatcacag
agagatctgaatgcatattccagccttgaagagcaaactctgcccatacagcccatctct
ggcaatgaagaggtgaccgctgctgggagcacagggcaagaagaatcagaaattgtgcag
cagcaagtagagagaacagatccagatttgtctttaaaactccgctgcagtggcttcccg
gtaaccactataaaaaatgaatccagtgggtctaatttacacttggaagatgttaccgtt
ccctcgaaagaaaaggcagatgcatgcattggagcacatttgaaatcacctggcataatt
attgggggaatctgtcaggtagagtcctgcagaactaatgctggagtgcagtcagaaaca
gagctgctaaaaaaatcactctttgaaacaagagacagcaaagtgactgaggaaaatgag
ttcaatataagtcaaggcctagagcaagatatatgtggaactagcgcaacagcactggaa
aagaacaggattagtggcctgtgtcagggagatggtgcttatggtgacaccttcgggagc
atcatctcttgcgtacagaggctagaaaagaaagaaactgaaagctgtaatatttcaaag
gaacaaataggcattagtgaagattctcccagcagagaactaaagctgggctctactgtg
gaggagctggcgagccttagcaaagacaatgaacggaatccaaatgagaccgatgctttt
aactgtatagtgaaaacggagagccaagaggcctctgccctgggtctagataatgtaagc
actagcagtgctaacagtgaggagatggatgagaattcgttccatttcttggggagtaac
agcagtctctataaagctgtgcagaagcagaccaagactgggaaaccttccaagttttta
gtgttctcaaaaatagcatctttcaagaaaaccaagacagcggctgctgaaaaccaaggt
agcagcagcttctttggcagcaaaacaaagacagaagaatttgatgctgggaaagaggat
gaagacacagaaagcttgcagtcttttaaaagcagttcacccagttctgccttccaaaga
aaggaaagctatacctctgaatattctgatgatgacgacttattttatgaaagacctgct
ggattgttcagcagaatcagcctgaggaaggcttctggctctggtcggatactgatggac
aacatagacacaaattctacttccccctcgttgaatgtcaaacactctgaagcacgagtc
ttagaatcagttgaaaataatgacagtgaagtgccacagtattctttggtgaggaaatcc
ctgagtgagaatgagtataaaagaaacaaaaatccagagggtaaaaaattcaggacaaga
ctggccttggcacataaatccttctcaagtttctttgaatccaaatccctggaaaaggaa
aatcctgaacagagtcccaaaggatcactgaaacatgaaaaggagaaagccaagcttcgc
caaagctcctggaaagcatttctgaaaagcagggaggctgatggactgaaaaatccaacc
ttagcaagtttatcaccatcacaggagagtcttaaaacaacccggggccaccagcaaggt
cctggtaatgttacaagaagaacatccacagagaagcaggagagctctaatggacaagca
tttttgagctcatatgagtttaatgccacctccacggatgccaactattctgacacctct
gtggaatccattgaggtctctacacctatagatatgagaagaaaaagagtactatcctat
gatctgactatcaaatgtccagaatatccagactatgctgagcagcgggaaacaatggtc
aacagttcagatacttctgaggaatactggctgagatctccctttagccccagtgacctg
caatcaccgtttactcagctaagcccctcttgcccccagctatcgacatatgaaggtaaa
gacatgccctgtcgtcccatgagccctaaaccacaaagtccaagacctggctctcaacgt
aagagtttccgttatcccgggagaataagtgccacttccatgatttctcttgggaacagc
tctgctatcgacagcaatttagaggcacccgagaggccaaagacactgaagcccaggggt
actctcttgctttctgtgcactcactggacaatgaatacctgagagaagacagtgggata
agcagccagtcacagatcagcttaaacactgcttcttcagttagcgatatactcagagat
gaggatccccaacagcaaagtcaaacgccacctgaaaagaggcccagtgagaaatgggtt
ctgcatcgcaaaaagaagtcccctcagatcatgctgtccccacggccattctccagcatt
gagagcaaagtctggatgctccccttcctcatcccagatggaaaagccaagaagacgtcg
cagaggaagagactcaaacccctgtacaagcgcttcagctgtgacgacatgtggctggag
aggtaccggaaaaggaatctagagaaggagacgcagttggagagagagattcaattgagg
aacctcccagaggaccagttaaaagctagaatgagtctgtccataacttctccagttgcc
tttgagattcttcccctgaagttgcatccattttcccagagcaccccaacaggcttagac
tgcgtgggctggagacggcgtatctcatttcctgtgatcactgatggggcgctggataag
acagctcttgcagatgatgtgggaagcgaggaggatctgtatgaggactttcggagttcc
aatcaccgctatggccatcctggaggaggaggagaacaacttgccatcaatgagctcatc
agcgatggcagcgtggtatacgcagaagccctctgggatcatgtcaccatggatgaccaa
gagctgggattcaaggctggcgatgtcatcgaagtgatggatgctaccaacaaggagtgg
tggtgggggaggatcctggacagcgaaggctggtttccagccagctttgtacggctccga
gtgaaccaagatgaacccatggaagactatcctatgaaggcagaggacggcaaagaggag
gatgccagcaccaccgcccggcgttatggagtggggcagaccagcaaggaccaaatgagg
accaatgttatcaacgagatcataagcacagagagagactacatcaaacacctgaaggac
atctgtgagggttacattaagcagtgccgcaagagggctgacatgtttacagaagaacag
ctgaagacaatctttgggaacatcgaagacatttacaaatgccagaaaaaatttgtaaaa
gcgctggagaagaaattcaacaaagaccatccacacttgagtgaggtcggctcctgcttc
ctagaatatcaaacagagttccagatttactccgagtactgcaacaaccaccccaacgcc
tgcgtggagctgtcccgactcaccaaagtcaacaagtatgtctacttctttgaagcgtgc
cgcctgcttcagaagatgatcgacatctctctggatgggtttctgctgactccagtgcag
aaaatctgcaagtatccactgcagctggctgaactactcaaatatactaacccccagcac
agggattttaaagatgttgaagctgccttaaatgccatgaagaacgttgctcgactgatc
aatgagagaaaaaggaggctggagaacatagacaaaattgcccagtggcagagttccata
gaggactgggagggtgaagacgtcctagtcagaagctcagaactcatctattctggggaa
ttaaccaaaatctcccagcctcaagcgaagagccaacagagaatgttcttcctctttgat
caccagctggtctgctgtaagaaggatctcctgcgccgggacatcctctattataagagt
cggatcaacatggatgacatggaaatagtggacgtggaggatgggaaggataaggacttc
aatatcagtgttaaaaatgcattcaagctgctctgcagggaccctgaggaagtccactta
ttctgtgcaaaaaagcctgaacagaaacagcgctggctcaaggcattcgagaatgaaagg
aaacaggttcagcttgaccaggaaactggtttttcaatcacagaggtgcagaagaagcag
gcgatgctgaatgccaacaaacagcaccacaccggaaagcctaaggctgtcaccaggccc
tactatgactttctgatgcgtcagaagcacccttctctgcctaccaacctcccccagcag
caagtcttcatgctggcagagcccgcgcaagccctcgaacttctggcagaacatcagcag
gctgacaccctttcggaagtgaggggcagctccctattgtgcctgaatccctactga
DBGET
integrated database retrieval system
