Trachemys scripta elegans (red-eared slider): 117882616
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Entry
117882616 CDS
T07347
Symbol
PLS3
Name
(RefSeq) plastin-3
KO
K17336
plastin-3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117882616 (PLS3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117882616 (PLS3)
04147 Exosome [BR:
tst04147
]
117882616 (PLS3)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
Check point factors
Other check point factors
117882616 (PLS3)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117882616 (PLS3)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117882616 (PLS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
CAMSAP_CH
EF-hand_FSTL1
EF-hand_8
DUF5580
Motif
Other DBs
NCBI-GeneID:
117882616
NCBI-ProteinID:
XP_034637019
LinkDB
All DBs
Position
9:2133883..2213494
Genome browser
AA seq
628 aa
AA seq
DB search
MASTTQISKDELEELREAFAKVDLNSNGFICDYELHELFKEANLPLPGYKVREIIQNLMI
DSDKNKDGKISFEEFVFIFQELKSSEIAKTFRKAINRKEGICAIGGTSELSSEGTQHSYS
EEEKYAFVNWINKALENDPDCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERA
INKKKLTPFIVQENLNLALNSASAIGCHVVNIGAEDLREGKPHLVLGLLWQIIKIGLFAD
IELSRNEALAALLRDGETLEDLMKLSPEELLLRWANFHLENAGWQKINNFSSDIKDSRAY
FHLLHQIAPKGQKEGETQIDINMSGFNEKDDLKRAEYMLQQADRLGCRQFVTPADVVSGN
PKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSLGVNPHVNHLYGD
LQDALVILQLYEKIKVPVDWNKVNKPPYPKLGANMKKLENCNYAVDLGKHPAKFSLVGIG
GQDLNDGNQTLTLALVWQLMRRYTLNVLEDLGDGQKANDDIIVNWVNRTLREAGKSTSIQ
SFKDKTISTSLAVVDLIDAIQPGCINYDLVKTGDLSEDDKQNNAMYAVSMARRIGARVYA
LPEDLVEVKPKMVMTVFACLMGRGMKKV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaccacgcagatctccaaagatgagctggaagaactgagagaggccttcgcc
aaagttgatctcaacagcaatggattcatttgtgattatgagctgcatgaactcttcaag
gaagctaatctgcctctcccaggatacaaagtgagagagatcattcagaatcttatgatt
gacagtgacaagaacaaggatgggaagattagctttgaagaatttgtgtttattttccaa
gaactgaaaagcagtgagattgctaagactttcagaaaagccatcaacagaaaagaggga
atttgtgctattggtggaacgtccgagctctccagtgaaggaacacaacattcttattca
gaggaagaaaaatatgcctttgtaaactggataaacaaagccttggaaaatgatcccgac
tgcaggcatgttattccaatgaatccaaatacagacgacctgttcaaagctgttggagat
gggattgttctatgtaaaatgatcaatctttctgttccggatacaattgacgaaagagca
atcaacaagaaaaaactcacaccatttatagttcaggaaaacttgaacttggcattgaat
tccgcctctgccattgggtgtcatgttgtcaatattggagccgaggacttgagggaaggg
aaaccacatctggtgctggggcttctctggcagattattaagattggcttgttcgccgac
atcgaactcagcagaaatgaagctttggctgccttacttcgtgatggtgagactttggag
gaccttatgaaactgtcccccgaagagctgcttctaagatgggcaaacttccatttggaa
aacgcagggtggcagaaaatcaataacttcagctccgacatcaaggattcgagagcctat
ttccatctcctccaccaaattgcaccaaaggggcagaaagaaggagagacgcagattgat
attaacatgtctggtttcaatgagaaggatgacttgaagagagcagaatacatgcttcag
caggcagacagactgggctgcagacagtttgttacccccgccgatgttgtcagtggtaat
cccaaactgaatttagcctttgttgcaaatttgttcaacaagtatccggcgcttaccaag
ccggaaaatcaggacatcgattggacgctactggaaggagagacacgtgaagaaaggacc
ttccgtaactggatgaactctctcggtgtgaatccacacgtaaaccatctgtatggtgac
ctgcaagatgcactagtaatattacaactatacgaaaagatcaaagttcctgttgactgg
aataaggttaacaagccaccgtaccccaagcttggtgcaaacatgaagaagcttgaaaac
tgtaactatgcagtggatttgggaaagcatccggccaaattctctctggtgggcattggt
ggacaggacctgaatgatggaaaccaaacactgacgctagctttagtctggcagctgatg
aggagatacaccctgaatgttctcgaggaccttggtgatggtcagaaagcaaatgatgac
atcatagtaaactgggtgaacaggacactgagagaagctggcaagtcaacctccattcag
agctttaaggacaagactatcagcactagcttggcagtggtggatttaattgatgccata
cagcctggctgtatcaactatgatcttgtaaagacaggggacttatcagaagatgacaaa
cagaataatgctatgtatgctgtgtccatggccagaagaattggagccagagtatatgct
cttccagaggaccttgtggaggtgaaacccaagatggttatgaccgtgtttgcctgtttg
atgggcagaggaatgaagaaagtgtaa
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integrated database retrieval system
