Trachemys scripta elegans (red-eared slider): 117882640
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Entry
117882640 CDS
T07347
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117882640 (AFF2)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117882640 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
117882640
NCBI-ProteinID:
XP_034637083
LinkDB
All DBs
Position
9:9785965..10194552
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AA seq
1266 aa
AA seq
DB search
MDLFDFFRDWDLEQQCHYEQDRSALKRKEWERRNQEVQQDEDLFASGFNLFGEPYKTNKG
DALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKNSVPQTPVDKNEQNFFPEQRNRMIP
SHQISGHSSTSMPPPSSLSSNSTLLHSHQSSRKSRTDWSRGGHNSNGAQPSQPSSQQSRT
KHSSSHDQPQGRYDDLYSCQSEQHKNGGAEEANPAASSSHSRRHNHSKSTTGEHSYKENS
HSKSPVELEFVGHGPGSPLPSTSLLSANNGLSTQSFPPGLHCKTSMVQQKPTAYVRPMDG
QDQVPNDSPELKPPIEIESGYGNQSFGTLLEGKANAPSSKNKLPKLTIPQASEVSLPNDS
SCVEEILREMTHSWPPPLTAIHTPGKAEQTKFSIPSKVQDSQHPTSGYNVQKWSDPAGKS
ATKSVPQKSMLEDDLKLSSDEDDHEQAAEKTKPRNIPVNGLPLQTAHGAVLAHSSGGSGS
SSESESSSESDSDSESSSSDSECNEESRSATPEPEPPSTNKWQLDKWLNKVNPHNKTIIN
NQNETHSENSSQSQSSQQTEGQNKGKLNNSLPQTDSKDRAVLSPIREKAKPRVAQKTPEA
KSSKQKSPAYNEPTSQRTPGKKQPKKVERTSSVEEYNWPKPNNTSNTPKEKDTQEPPEQP
KVRTKATAGKTAPRKEPRTSTGLASEKKKYRGPSKTVPKSREFIETDSSTSDSNTDQEES
LQAKILPAFSGPANGLKVKDSSSNILSVSSLTSNSSNTSIDQTSNDLEEQLFSPIPIVQN
ELLSPLREFEELKSLWVKIDLSLLSRIPGQDPGETVSVKTEPREANVKHRRQSRESPTAA
AEKPATKSKRKHKQSESLDTFGETKKQRLEDTAASCLLPPCISPIPNHRLTSTKDGSSVK
KVTKKREEKLFPPPLSPLLDEPAHRRHSSDNSSFSQENSVTNSLQTGSASSSSKFGKNEN
KSSSNPKGICEEESRHRPTNSLLDTSHLETDIWSTMPTLSNGKSESRRPKITFDDMLHNA
DYYMQEAKKLKHKADALLEKFGKAVNYADAALSFIECGNAMERDPLEAKSPYTMYSETVE
LIRYAMRLKNFTGSSATEGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKNS
SKASQAPSPWGGNGKSTETPSPMSLSPSPVSSVGSSTGTAGSSSAGTITIPQRIHHMAAS
HVNITNNVLRSYEHWDMADKLTKENKEFFVDLDSVMGPLTQHSSMTSLVRYVRQGLHWLR
MEAHLL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggatctattcgactttttcagggactgggacttagagcagcagtgtcactatgagcaa
gaccggagtgcacttaaaaggaaagaatgggagcgaagaaatcaagaagtccagcaagat
gaagatctctttgcttcaggttttaatctctttggggaaccctacaagacaaataaaggc
gatgcccttgctaaccgtgtccaaaacacattgggaaactatgatgaaatgaaggacttg
ttaaccaaccattctaaccagagccaccttgtaggaatcccaaagaattctgtaccacag
actcccgttgacaaaaatgaacagaacttttttccagaacagagaaacaggatgatcccg
tctcaccagatcagcggtcactcgtcaacgtcaatgcccccaccttcttcactgtcatca
aattctactttgctacacagtcaccagagcagcaggaaatccaggacagattggtcacgt
ggtggtcacaactctaatggtgcacagccaagccaacccagtagtcaacagagtaggaca
aagcatagctcttcacatgaccagcctcaaggcaggtacgacgatctctacagctgtcag
agtgagcaacataaaaatggaggcgctgaggaagcaaacccggctgcatcatcttcacat
tcacggaggcacaatcattccaaatcaacaactggagaacattcttataaagaaaacagt
cattccaagtcacctgtagaacttgagtttgtagggcacggtcctggatctccacttcct
tctacatctttgttatctgcaaacaatggtctctcaacccagagtttcccaccaggactg
cactgtaaaactagcatggtccagcaaaagcctacagcttacgtaaggcctatggatggt
caggaccaagtacctaatgactcacctgaactgaaacctccaatagaaattgagagtgga
tatggaaatcaatcatttggaacactgttggaaggaaaagctaatgcacccagttctaag
aataaattaccaaagcttaccatccctcaagctagtgaggttagccttcccaatgattcc
agctgtgtggaagaaatattacgggagatgacccattcctggcctccacctcttactgct
attcacacccccggcaaggctgagcagaccaagttttccatcccaagcaaggtgcaggat
tcccagcacccgacctcaggatacaatgtacaaaagtggagtgatccagcagggaaatct
gccaccaagtcagtgccacaaaagtcaatgcttgaagatgatctaaaactcagcagtgat
gaagatgaccacgaacaggctgccgaaaagacaaaacctagaaacattcctgtaaatggc
cttcctttgcagacagcacacggtgcagttttagcacattccagcggaggctctgggagc
tcaagtgagtccgagagcagctccgagtccgattccgacagcgaaagcagctccagtgac
agtgagtgtaacgaagagtcacgcagcgcaactccggagcctgaacctccttcaacaaac
aagtggcagctggataaatggctaaataaagtgaatccccataacaagaccattatcaac
aaccaaaatgagactcacagtgagaacagttctcagtctcagagcagccaacagactgaa
ggacaaaacaaagggaagcttaataacagtctgccccagaccgattccaaagacagggcc
gtccttagtcccatccgggagaaagccaaaccacgagttgcccagaaaactccagaggcg
aaaagctccaagcagaagtcaccagcttataatgagccaacttcacaaaggactcctggg
aaaaagcaacccaaaaaggtagaaaggacttccagtgtagaagagtataactggcccaaa
ccaaataataccagcaacactcccaaagaaaaagatacacaggaaccaccagagcagcca
aaggttcgcacaaaagcaacagctggaaagacagctccaagaaaagaaccacggactagc
acgggacttgcttctgagaagaaaaagtacagaggccctagcaaaactgtccctaaatcc
cgtgaatttattgaaaccgattcgtctacttctgattcaaacacagaccaggaagagagc
ctgcaggctaaaatattaccagctttcagtgggcctgccaatggcctcaaagtaaaagac
tccagtagtaacatcctcagtgtaagtagtttaactagcaacagcagcaacacatcaata
gaccagaccagcaatgatttagaggaacaactcttttcaccgatcccaattgtgcaaaat
gaacttctgtccccactgagggaatttgaagaactcaaatccctttgggtgaaaatagat
cttagtttactctctagaatacccggacaagaccctggtgagacagtgagtgtgaaaact
gaaccgcgagaggcaaatgtgaaacacaggcgacaatctcgagagtcccccaccgcagcc
gctgaaaagcccgccacaaaatccaaaaggaagcacaagcagtccgaaagcttggataca
tttggtgaaaccaagaaacagcgtctggaggacaccgcagcctcatgcctacttccacca
tgtatttctccaatacctaatcacagattaaccagcactaaagacgggagttcagttaaa
aaggtgactaagaaaagagaagagaagttgttccctcctccgttatccccgctgctggat
gagccagcacacagacggcacagcagtgacaacagctccttcagccaagagaacagcgtc
acaaactccttgcagaccggcagcgcttcctcttcttctaaattcggaaagaatgagaac
aaatcctcttcgaaccccaaaggaatctgtgaggaggaatctcgccatagaccaacaaac
agtctccttgataccagccatctagaaacagacatctggtctacaatgcctacactctcc
aatgggaaatctgagtcaagaagacctaaaataacatttgatgacatgcttcacaatgca
gactattacatgcaagaggctaagaagctaaagcacaaagcggacgcactgttggagaag
ttcggcaaagcagtgaattatgctgatgctgctctctccttcattgagtgcgggaatgct
atggagcgagatccattagaagctaaatccccatacaccatgtactcagagactgtggaa
ctcatcaggtatgcaatgagactcaagaatttcacaggctcatctgccacggaaggagac
aagaaactagcagttttatgctaccgatgcttatcactcctctacttgagaatgtttaaa
ctaaagaaagaccatgctatgaagtactccagatctctgatggaatattttaagaactct
tcaaaagcctcccaggccccctctccttggggaggcaatggaaagagcacagagactcca
tcccccatgtctctcagtccatctccagtcagttctgtagggagcagtacaggcactgct
gggtcctcgtcagcaggaaccatcaccatcccccagcgcatccaccatatggctgccagc
catgtaaatatcaccaacaacgtcttgcggagctacgagcactgggacatggccgacaaa
ctgactaaggagaacaaagagttctttgtagacctggactcagtcatgggaccattaaca
caacacagcagtatgaccagtctggtccgttacgttcgacaaggacttcactggctccgc
atggaggcgcatttgttgtag
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integrated database retrieval system
