Trachemys scripta elegans (red-eared slider): 117882675
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Entry
117882675 CDS
T07347
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117882675 (ZC3H12B)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117882675 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
117882675
NCBI-ProteinID:
XP_034637164
LinkDB
All DBs
Position
9:22523817..22628884
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AA seq
838 aa
AA seq
DB search
MTAWSMVEKLKMEKRHSKEERNVEQDAGDCSAESEEWTSSESEPEQQCFKNSCSNTQWRE
KEISTKPHRQLCRSPCLDRPSFSQSSILQDLKLEECKINLDKEYQAKMDFALKLGYAGDQ
IQAVLNKLGADALINDILAELVRLGNKGESEGQGSVGSSSGTLVPRGPCPKEMASPELSL
EDEVVDNTDNLRPIVIDGSNVAMSHGNKEEFSCRGIQLAVEWFLEKGHKDITVFVPAWRK
EQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSND
NYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQ
PCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGSSIS
KGEINSEVKRIAPKRQSDPSIRSVAVEPEERLSVARKSEANSVPSLVSALSVPTIPPSKS
HAVGALNTRSASSPVPGSSQFTHQKSSLEHMASVQYPPILVTNSHGTSVSYTDQYPKYES
LGDHGYYSMLSDFSNLSISSMRNTDYYGANADQGMYSRNSSPCPDNRLSHTSNDSYSSYN
DLYLGVADARAEDNVKVHRLSSQNRLQPFSHGYHEALTRVQSYGTEEPKQLPRKQSVSHL
ALHVQHPVVGARSSCPGDYPVPQNVHPSATAQPSRALVMTRMDSISDSRLYESNPMRQRR
PPLCREQHASWDPLPCAADTYAYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGV
CGEPQEQHIIPEHQYQTYKNLCNIFPAGIVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtggagaagttgaaaatggagaagaggcattccaaagaagag
aggaatgtggaacaggatgctggggactgcagtgctgaatctgaggaatggacaagctca
gaaagtgagcctgaacaacaatgcttcaaaaacagctgtagcaatactcagtggagggaa
aaggaaatttctactaaaccacataggcaactctgtcgctctccttgcctggatcgtcca
agtttctcacagagcagtatccttcaggacttgaaactggaagagtgtaaaataaacttg
gacaaggaataccaggctaaaatggattttgctttaaagcttgggtatgctggagatcag
atccaggcagtgctgaacaagttgggagcagatgctctaatcaatgatattttggcagaa
ctcgtgagacttggcaacaagggtgaatcagagggacaaggcagtgtcggcagtagtagt
ggtactctggtgcccaggggtccttgcccaaaggaaatggccagccctgaactgtcactt
gaagatgaagtagtggataacactgacaacttaagaccaattgtcattgatggaagtaac
gtggctatgagccatgggaataaagaagaattttcctgtcggggaattcagctagctgtt
gagtggtttctggagaaaggacataaagatatcactgtatttgtacctgcgtggagaaaa
gagcagtctcgacctgatgcaccaattacagatcaagaaattttacgtaaattggagaaa
gaaaaaattcttgtcttcaccccatctcggcgagttcagggaagaagggtggtctgctat
gatgaccggttcatagtaaaactggcttttgactcagatggcatcattgtgtcaaatgac
aattatcgggatcttcagaatgaaaagccagagtggaagaaattcatagaggaacgcctg
ctaatgtattcttttgtgaatgacaaatttatgcctcctgatgatcctttaggacgccat
ggtccaagccttgaaaatttcctaagaaaaaggcctgttattcctgaacataaaaaacaa
ccatgcccttatggcaaaaaatgcacctatggacacaaatgtaaatattatcatccagaa
cgcgcaaatcagcctcagaggtcagtagcagatgagcttcgaataagtgccaaattgtct
gctgtgaaaactatgagtgagggagctttagccaaatgtggcacaggatcatccatttcc
aaaggagaaatcaattctgaagtgaaacgtattgcccccaaacgccagtcagacccaagc
attagatcagttgctgtggaacctgaggaaagactgtcagtagctcggaagtcagaagcc
aactctgtcccttctcttgtttctgcattaagtgtaccaacaatccctccttcaaaaagc
catgctgttggtgcattaaatactcgttctgcaagcagccctgtaccagggtcatcacaa
tttactcatcaaaaatcctcactagaacacatggccagtgtgcagtatcctcccatactg
gtcaccaatagccatggcacttctgttagctatacagaccagtatcccaaatatgaatct
ttaggagaccatggctactattccatgctcagtgatttctccaatttgagcataagcagt
atgcgtaacacagattattatggggctaatgcagaccaagggatgtactctagaaattca
agcccctgtcctgacaatcgcttaagccatacaagtaatgattcttattcctcttataat
gatttgtatctgggtgtagcagatgccagggcagaagacaatgtgaaggtccacagactt
tcatcccaaaatcgtcttcagcctttttcccatggttaccatgaagccttaactagagtt
cagagttatggaactgaagagcctaaacaactccctcgcaaacagtctgtttcccattta
gcactgcatgtccagcatccagttgttggagcacggtccagttgtccaggagactaccca
gtgcctcagaatgttcatccatcagccactgcacagccaagccgtgccttggtcatgaca
agaatggacagtatttccgactcacggctttatgaaagtaaccctatgcggcagagaagg
ccacccctctgtcgagagcagcatgctagttgggatccattaccatgtgctgctgatact
tacgcttaccactcctatccactgagcaacaatctcatgcaaccatgttatgaacctgta
atggtaagaagcatgcctgaaaagatggagcaactgtggaggaatccctggattggggta
tgtggagagccacaggaacagcatattattccagaacatcagtatcagacatacaagaat
ctctgcaatattttccctgctggtattgtcctctcggtaatggagaaaaatccccatatg
acagacgcacaacagctggcagctatgattgttgccaaattgagaacagggcgttaa
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